Janette Edson

Featured projects	Duration
Adaptive sequencing for metagenomic sequencing of low biomass samples Genome Innovation Hub Collaborative Project (UQ infrastructure)	2022

Manuzzi, Alice, Jiménez-Mena, Belen, Henriques, Romina, Holmes, Bonnie J., Pepperell, Julian, Edson, Janette, Bennett, Mike B., Huveneers, Charlie, Ovenden, Jennifer R. and Nielsen, Einar E. (2022). Retrospective genomics highlights changes in genetic composition of tiger sharks (Galeocerdo cuvier) and potential loss of a south-eastern Australia population. Scientific Reports, 12 (1) 6582, 6582. doi: 10.1038/s41598-022-10529-w

Jiménez‐Mena, Belén, Flávio, Hugo, Henriques, Romina, Manuzzi, Alice, Ramos, Miguel, Meldrup, Dorte, Edson, Janette, Pálsson, Snæbjörn, Ólafsdóttir, Guðbjörg Ásta, Ovenden, Jennifer R. and Nielsen, Einar Eg (2022). Fishing for DNA? Designing baits for population genetics in target enrichment experiments: guidelines, considerations and the new tool supeRbaits. Molecular Ecology Resources, 22 (5), 2105-2119. doi: 10.1111/1755-0998.13598

de Lima, Andressa O., Afonso, Juliana, Edson, Janette, Marcellin, Esteban, Palfreyman, Robin, Porto-Neto, Laercio R., Reverter, Antonio and Fortes, Marina R. S. (2021). Network analyses predict small RNAs that might modulate gene expression in the testis and epididymis of Bos indicus bulls. Frontiers in Genetics, 12 610116, 610116. doi: 10.3389/fgene.2021.610116

Ahmed, Warish, Tscharke, Ben, Bertsch, Paul M., Bibby, Kyle, Bivins, Aaron, Choi, Phil, Clarke, Leah, Dwyer, Jason, Edson, Janette, Nguyen, Thi Minh Hong, O'Brien, Jake W., Simpson, Stuart L., Sherman, Paul, Thomas, Kevin V., Verhagen, Rory, Zaugg, Julian and Mueller, Jochen F. (2021). SARS-CoV-2 RNA monitoring in wastewater as a potential early warning system for COVID-19 transmission in the community: a temporal case study. Science of The Total Environment, 761 144216, 144216. doi: 10.1016/j.scitotenv.2020.144216

Chen, Min, Zhao, Qiong-Yi, Edson, Janette, Zhang, Zong Hong, Li, Xiang, Wei, Wei, Bredy, Timothy and Reutens, David C. (2020). Genome-wide microRNA profiling in brain and blood samples in a mouse model of epileptogenesis. Epilepsy Research, 166 106400, 106400. doi: 10.1016/j.eplepsyres.2020.106400

Ahmed, Warish, Angel, Nicola, Edson, Janette, Bibby, Kyle, Bivins, Aaron, O'Brien, Jake W., Choi, Phil M., Kitajima, Masaaki, Simpson, Stuart L., Li, Jiaying, Tscharke, Ben, Verhagen, Rory, Smith, Wendy J.M., Zaugg, Julian, Dierens, Leanne, Hugenholtz, Philip, Thomas, Kevin V. and Mueller, Jochen F. (2020). First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: a proof of concept for the wastewater surveillance of COVID-19 in the community. Science of the Total Environment, 728 138764, 138764. doi: 10.1016/j.scitotenv.2020.138764

Ahmed, Warish, Bertsch, Paul M., Angel, Nicola, Bibby, Kyle, Bivins, Aaron, Dierens, Leanne, Edson, Janette, Ehret, John, Gyawali, Pradip, Hamilton, Kerry, Hosegood, Ian, Hugenholtz, Philip, Jiang, Guangming, Kitajima, Masaaki, Sichani, Homa T., Shi, Jiahua, Shimko, Katja M., Simpson, Stuart L., Smith, Wendy J. M., Symonds, Erin M., Thomas, Kevin V., Verhagen, Rory, Zaugg, Julian and Mueller, Jochen F (2020). Detection of SARS-CoV-2 RNA in commercial passenger aircraft and cruise ship wastewater: a surveillance tool for assessing the presence of COVID-19 infected travelers. Journal of Travel Medicine, 27 (5) ARTN taaa116, 1-11. doi: 10.1093/jtm/taaa116

Dick, Alec L. W., Zhao, Qiongyi, Crossin, Rose, Baker-Andresen, Danay, Li, Xiang, Edson, Janette, Roeh, Simone, Marshall, Victoria, Bredy, Timothy W., Lawrence, Andrew J. and Duncan, Jhodie R. (2020). Adolescent chronic intermittent toluene inhalation dynamically regulates the transcriptome and neuronal methylome within the rat medial prefrontal cortex. Addiction Biology, 26 (3) e12937, e12937. doi: 10.1111/adb.12937

Williams, Sarah M., An, Joon Yong, Edson, Janette, Watts, Michelle, Murigneux, Valentine, Whitehouse, Andrew J. O., Jackson, Colin J., Bellgrove, Mark A., Cristino, Alexandre S. and Claudianos, Charles (2018). An integrative analysis of non-coding regulatory DNA variations associated with autism spectrum disorder. Molecular Psychiatry, 24 (11), 1-13. doi: 10.1038/s41380-018-0049-x

Gratten, Jacob, Zhao, Qiongyi, Benyamin, Beben, Garton, Fleur, He, Ji, Leo, Paul J., Mangelsdorf, Marie, Anderson, Lisa, Zhang, Zong-Hong, Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Edson, Janette, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jin, Zi-Bing, Li, Zhongshan, Lin, Yong, Liu, Xiaolu, Marshall, Mhairi, Mowry, Bryan J., Ran, Shu, Reutens, David C., Song, Sharon, Tan, Li-Jun, Tang, Lu, Wallace, Robyn H. ... Fan, Dongsheng (2017). Whole-exome sequencing in amyotrophic lateral sclerosis suggests NEK1 is a risk gene in Chinese. Genome Medicine, 9 (97) 97, 97. doi: 10.1186/s13073-017-0487-0

Benyamin, Beben, He, Ji, Zhao, Qiongyi, Gratten, Jacob, Garton, Fleur, Leo, Paul J., Liu, Zhijun, Mangelsdorf, Marie, Al-Chalabi, Ammar, Anderson, Lisa, Butler, Timothy J., Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Devine, Matthew, Edson, Janette, Fifita, Jennifer A., Furlong, Sarah, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jeffree, Rosalind L., Jin, Zi-Bing, Li, Zhongshan, Li, Ting, Li, Mengmeng, Lin, Yong, Liu, Xiaolu ... Fan, Dongsheng (2017). Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis. Nature Communications, 8 (1) 611, 611. doi: 10.1038/s41467-017-00471-1

Garton, Fleur C., Benyamin, Beben, Zhao, Qiongyi, Liu, Zhijun, Gratten, Jacob, Henders, Anjali K., Zhang, Zong-Hong, Edson, Janette, Furlong, Sarah, Morgan, Sarah, Heggie, Susan, Thorpe, Kathryn, Pfluger, Casey, Mather, Karen A., Sachdev, Perminder S., McRae, Allan F., Robinson, Matthew R., Shah, Sonia, Visscher, Peter M., Mangelsdorf, Marie, Henderson, Robert D., Wray, Naomi R. and McCombe, Pamela A. (2017). Whole exome sequencing and DNA methylation analysis in a clinical amyotrophic lateral sclerosis cohort. Molecular Genetics and Genomic Medicine, 5 (4), 418-428. doi: 10.1002/mgg3.302

Nielsen, E. E., Morgan, J. A. T., Maher, S. L., Edson, J., Gauthier, M., Pepperell, J., Holmes, B. J., Bennett, M. B. and Ovenden, J. R. (2017). Extracting DNA from 'jaws': high yield and quality from archived tiger shark (Galeocerdo cuvier) skeletal material. Molecular Ecology Resources, 17 (3), 431-442. doi: 10.1111/1755-0998.12580

Widagdo, Jocelyn, Zhao, Qiong-Yi, Kempen, Marie-Jeanne, Tan, Men Chee, Ratnu, Vikram S., Wei, Wei, Leighton, Laura, Spadaro, Paola A., Edson, Janette, Anggono, Victor and Bredy, Timothy W. (2016). Experience-dependent accumulation of N6-methyladenosine in the prefrontal cortex is associated with memory processes in mice. Journal of Neuroscience, 36 (25), 6771-6777. doi: 10.1523/JNEUROSCI.4053-15.2016

Ragan, Chikako, Patel, Kalpana, Edson, Janette, Zhang, Zong-Hong, Gratten, Jacob and Mowry, Bryan (2016). Small non-coding RNA expression from anterior cingulate cortex in schizophrenia shows sex specific regulation. Schizophrenia Research, 183, 82-87. doi: 10.1016/j.schres.2016.11.024

McNevin, Dennis, Edson, Janette, Robertson, James and Austin, Jeremy J. (2015). Reduced reaction volumes and increased Taq DNA polymerase concentration improve STR profiling outcomes from a real-world low template DNA source: telogen hairs. Forensic Science, Medicine, and Pathology, 11 (3), 326-338. doi: 10.1007/s12024-015-9679-3

Mitchell, Kieren J., Pratt, Renae C., Watson, Laura N., Gibb, Gillian C., Llamas, Bastien, Kasper, Marta, Edson, Janette, Hopwood, Blair, Male, Dean, Armstrong, Kyle N., Meyer, Matthias, Hofreiter, Michael, Austin, Jeremy, Donnellan, Stephen C., Lee, Michael S. Y., Phillips, Matthew J. and Cooper, Alan (2014). Molecular phylogeny, biogeography, and habitat preference evolution of marsupials. Molecular Biology and Evolution, 31 (9), 2322-2330. doi: 10.1093/molbev/msu176

Zhang, Zong Hong, Jhaveri, Dhanisha J., Marshall, Vikki M., Bauer, Denis C., Edson, Janette, Narayanan, Ramesh K., Robinson, Gregory J., Lundberg, Andreas E., Bartlett, Perry F., Wray, Naomi R. and Zhao, Qiong-Yi (2014). A comparative study of techniques for differential expression analysis on RNA-seq data. PLoS One, 9 (8) e103207, 1-11. doi: 10.1371/journal.pone.0103207

An, J. Y., Cristino, A. S., Zhao, Q., Edson, J., Williams, S. M., Ravine, D., Wray, J., Marshall, V. M., Hunt, A., Whitehouse, A. J. O. and Claudianos, C. (2014). Towards a molecular characterization of autism spectrum disorders: an exome sequencing and systems approach. Translational Psychiatry, 4 (6) e394, e394.1-e394.9. doi: 10.1038/tp.2014.38

Edson, Janette, Brooks, Elizabeth M., McLaren, Carolyn, Robertson, James, McNevin, Dennis, Cooper, Alan and Austin, Jeremy J. (2013). A quantitative assessment of a reliable screening technique for the STR analysis of telogen hair roots. Forensic Science International: Genetics, 7 (1), 180-188. doi: 10.1016/j.fsigen.2012.10.001

Renfree, MB, Papenfuss, AT, Deakin, JE, Lindsay, J, Heider, T, Belov, K, Rens, W, Waters, PD, Pharo, EA, Shaw, G, Wong, ESW, Lefevre, CM, Nicholas, KR, Kuroki, Y, Wakefield, MJ, Zenger, KR, Wang, CW, Ferguson-Smith, M, Nicholas, FW, Hickford, D, Yu, HS, Short, KR, Siddle, HV, Frankenberg, SR, Chew, KY, Menzies, BR, Stringer, JM, Suzuki, S, Hore, TA ... Worley, KC (2011). Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development (vol 12, pg R81, 2011). Genome Biology, 12 (12) 414. doi: 10.1186/gb-2011-12-12-414

Janette Edson

Publications

Journal Articles