Professor Robert Henry

Featured projects	Duration
Assembly of complex genome (Macadamia) using single molecule sequencing Genome Innovation Hub Collaborative Project (UQ infrastructure)	2019

Henry, Robert (2010). Plant resources for food, fuel and conservation. New York, NY, United States: Earthscan. doi: 10.4324/9781849774543

Henry, Robert (1997). Practical applications of plant molecular biology. London, United Kingdom: Chapman & Hall.

Cheng, Bing, Henry, Robert and He, Hongju (2024). Advances in genomics for improving coffee beverage quality. Advances in Botanical Research. (pp. _-_) San Diego, CA, United States: Academic Press. doi: 10.1016/bs.abr.2024.04.007

Wambugu, Peterson W., Ndjiondjop, Marie-Noelle, Rangan, Parimalan and Henry, Robert J. (2024). Application of Genomics in Supporting Efficient Conservation and Utilization of Plant Genetic Resources. Sustainable Development and Biodiversity. (pp. 339-361) Singapore: Springer. doi: 10.1007/978-981-99-5245-8_10

Okemo, Pauline, Wijesundra, Upendra, Nakandala, Upuli, Ananda, Galaihalage K.S., Vanambathina, Prameela, Hasan, Sharmin, Abdulla, Muhammad, Sharma, Priyanka, Manatunga, Sachini, Pazhany, Adhini, Kharabian Masouleh, Ardy, Nath, Onkar, Mitter, Neena, Furtado, Agnelo and Henry, Robert J. (2022). The use of genome sequencing to improve crops for tropical agriculture. Next-generation sequencing and agriculture. (pp. 59-91) edited by Philipp E. Bayer and David Edwards. Wallingford, Oxfordshire, United Kingdom: CAB International. doi: 10.1079/9781789247848.0004

Xu, Danghui, Hossain, Mohammad Anwar and Henry, Robert (2022). Biological function of silicon in a grassland ecosystem. Silicon and nano-silicon in environmental stress management and crop quality improvement: progress and prospects. (pp. 43-54) edited by Hassan Etesami, Abdullah H. Al Saeedi, Hassan El-Ramady, Masayuki Fujita, Mohammad Pessarakli and Mohammad Anwar Hossain. Amsterdam, Netherlands: Elsevier. doi: 10.1016/B978-0-323-91225-9.00018-2

Bandehagh, Ali, Dehghanian, Zahra, Henry, Robert and Anwar Hossain, Mohammad (2021). Salinity tolerance in canola: insights from proteomic studies. Brassica breeding and biotechnology . (pp. ---) edited by A. K. M. Aminul Islam. -: IntechOpen. doi: 10.5772/intechopen.96649

Ashrafuzzaman, Md, Henry, Robert and Frei, Michael (2021). Molecular Breeding for Improving Ozone Tolerance in Rice: Recent Progress and Future Perspectives. Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality. (pp. 180-200) Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/9781119633174.ch9

Hossain, Mohammad A., Hoque, Tahsina S., Zaid, Abbu, Wani, Shabir H., Mostofa, Mohammad G. and Henry, Robert (2021). Targeting the Ascorbate-Glutathione Pathway and the Glyoxalase Pathway for Genetic Engineering of Abiotic Stress-Tolerance in Rice. Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality. (pp. 398-427) Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/9781119633174.ch21

Rangan, Parimalan, Furtado, Agnelo, Henry, Robert and Gaikwad, Ambika (2021). Development of Transcriptome Analysis Methods. Comprehensive Foodomics. (pp. 462-471) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22752-2

Rangan, Parimalan, Furtado, Agnelo and Henry, Robert (2021). Wheat Grain Transcriptome. Comprehensive Foodomics. (pp. 501-512) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22730-3

Henry, Robert J. (2021). Introduction to Transcriptomics. Comprehensive Foodomics. (pp. 439-439) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-12-816395-5.00002-2

Kumar, Pardeep, Choudhary, Mukesh, Jat, B. S., Dagla, M. C., Singh, Vishal, Das, Abhijit Kumar, Kumar, Santosh, Longmei, Ningthaipuilu, Henry, Robert J. and Wani, Shabir Hussain (2021). Isolation of genes/quantitative trait loci for drought stress tolerance in maize. Molecular breeding in wheat, maize and sorghum: strategies for improving abiotic stress tolerance and yield. (pp. 267-281) edited by Mohammad Anwar Hossain, Mobashwer Alam, Saman Seneweera, Sujay Rakshit and Robert Henry. Wallingford, United Kingdom: CABI. doi: 10.1079/9781789245431.0015

Kuram Tirumala, Ravikiran, Subbaiyan, Gopala Krishnan, Singh, Ashok Kumar, Furtado, Agnelo and Henry, Robert James (2021). RNA-Seq to understand transcriptomes and application in improving crop quality. Comprehensive foodomics. (pp. 472-485) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22728-5

Furtado, Agnelo and Henry, Robert J. (2021). RNA extraction for transcriptome analysis. Comprehensive foodomics. (pp. 440-450) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22727-3

Hoang, Nam V. and Henry, Robert J. (2021). Iso-Seq long read transcriptome sequencing. Comprehensive foodomics. (pp. 486-500) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22729-7

Thirugnanasambandam, Prathima P., Mason, Patrick J., Pazhany, Adhini S., Shanmugavel, SenthilKumar, Hoang, Nam V. and Henry, Robert J. (2021). Transcriptome of sugarcane, a highly complex polyploid. Comprehensive foodomics. (pp. 614-626) edited by Alejandro Cifuentes. Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22734-0

Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2021). RNA extraction from plant seeds. Comprehensive foodomics. (pp. 451-461) edited by Alejandro Cifuentes. Oxford, United Kingdom: Elsevier. doi: 10.1016/b978-0-08-100596-5.22751-0

Hossain, Mohammad Anwar, Hassan, Lutful, Md. Iftekharuddaula, Khandakar, Kumar, Arvind and Henry, Robert (2021). Preface. Molecular Breeding for Rice Abiotic Stress Tolerance and Nutritional Quality. (pp. xix-xx) Hoboken, NJ United States: John Wiley & Sons.

Cheng, Bing and Henry, Robert J. (2020). Coffee bean transcriptome. Reference Module in Food Science. (pp. 627-639) Amsterdam, Netherlands: Elsevier. doi: 10.1016/b978-0-08-100596-5.22736-4

Shaw, Lindsay, Nath, Onkar, Fletcher, Stephen, Henry, Robert, Mitter, Neena and Hayward, Alice (2020). Avocado transcriptomic resources. Reference Module in Food Science. (pp. 544-557) Amsterdam, Netherlands: Elsevier BV. doi: 10.1016/b978-0-08-100596-5.22733-9

Henry, Robert J. (2020). Cereal genomics databases and plant genetic resources in crop improvement. Cereal genomics: methods and protocols. (pp. 9-14) edited by Luis M. Vaschetto. New York, NY, United States: Humana Press. doi: 10.1007/978-1-4939-9865-4_2

Hasan, Sharmin and Henry, Robert J. (2020). Wild Oryza for quality improvement. The future of rice demand: quality beyond productivity. (pp. 299-329) edited by Antonio Costa de Oliveira, Camila Pegoraro and Vívian Ebeling Viana. Cham, Switzerland: Springer. doi: 10.1007/978-3-030-37510-2_13

Subbaiyan, Gopala Krishnan, Masouleh, Ardashir K., Furtado, Agnelo, Waters, Daniel L. E. and Henry, Robert J. (2019). Re-sequencing resources to improve starch and grain quality in rice. Rice Grain Quality. (pp. 201-240) edited by Nese Sreenivasulu. New York, NY, United States: Humana Press Inc.. doi: 10.1007/978-1-4939-8914-0_12

Mondal, Tapan K. and Henry, Robert J. (2018). The wild Oryza genomes preface. The wild Oryza genomes. (pp. XIII-XV) edited by Tapan K. Mondal and Robert J. Henry. Cham, Switzerland: Springer.

Rana, Anuj, Karunakaran, Aneesh, Fitzgerald, Timothy L., Sabburg, Rosalie, Aitken, Elizabeth A. B., Henry, Robert J., Powell, Jonathan J. and Kazan, Kemal (2018). A highly efficient and reproducible Fusarium spp. inoculation method for Brachypodium distachyon. Brachypodium genomics: methods and protocols. (pp. 43-55) edited by Gaurav Sablok, Hikmet Budak and Peter J. Ralph. New York, NY, United States: Humana Press. doi: 10.1007/978-1-4939-7278-4_4

Henry, Robert J. (2017). Oryza australiensis Domin. The wild Oryza genomes. (pp. 61-66) edited by Tapan K. Mondal and Robert J. Henry. Cham, Switzerland: Springer.

Wambugu, Peterson W. and Henry, Robert J. (2017). Oryza bathii A. Chev. The wild Oryza genomes. (pp. 67-74) edited by Tapan K. Mondal and Robert J. Henry. Cham, Switzerland: Springer. doi: 10.1007/978-3-319-71997-9_6

Moner, Ali Mohammad and Henry, Robert J. (2017). Oryza meridionalis N. Q. Ng. The wild Oryza genomes. (pp. 177-182) Cham, Switzerland: Springer.

Henry, Robert (2017). Plant Genetic Resources. Routledge Handbook of Agricultural Biodiversity. (pp. 15-29) edited by Danny Hunter, Luigi Guarino, Charles Spillane and Peter C. McKeown. United Kingdom: Routledge.

Wambugu, Peterson W. , Nyamongo, Desterio, Ndjiondjop, Marie-Noelle and Henry, Robert J. (2017). Evolutionary relationships among the Oryza species. The wild Oryza genomes. (pp. 41-54) edited by Tapan K. Mondal and Robert J. Henry. Cham, Switzerland: Springer. doi: 10.1007/978-3-319-71997-9_3

Henry, Robert J. (2017). Genomics strategies for germplasm characterization and the development of climate resilient crops. Crop breeding: bioinformatics and preparing for climate change. (pp. 3-12) edited by Santosh Kumar. Oakville, ON, United States: Apple Academic Press.

Henry, R. J. (2016). Biofuels from crop plants. Encyclopedia of applied plant sciences. (pp. 177-179) edited by Brian Thomas, Brian G. Murray and Denis J. Murphy. Oxford, United Kingdom: Elsevier. doi: 10.1016/B978-0-12-394807-6.00169-6

Henry, R. J. (2016). Genomics of food grains. Encyclopedia of food grains. (pp. 360-364) edited by Colin Wrigley, Harold Corke, Koushik Seetharaman and Jon Faubion. Kidlington, Oxford, United Kingdom: Elsevier. doi: 10.1016/B978-0-12-394437-5.00221-7

Eliott, Frances, Shepherd, Mervyn, Rossetto, Maurizio and Henry, Robert (2016). The reproductive systems of Davidson’s plum (Davidsonia jerseyana, Davidsonia pruriens and Davidsonia johnsonii) and the potential for domestication. Australian native plants: cultivation and uses in the health and food industries. (pp. 49-67) edited by Yasmina Sultanbawa and Fazal Sultanbawa. Boca Raton, FL United States: CRC Press. doi: 10.1201/b20635-5

Nevo, Eviatar and Henry, Robert (2015). Global warming and evolution of wild cereals. Crop wild relatives and climate change. (pp. 44-60) edited by Robert Redden, Shyam S. Yadav, Nigel Maxted, Mohammad Ehsan Dulloo, Luigi Guarino and Paul Smith. Hoboken, NJ, United States: Wiley. doi: 10.1002/9781118854396.ch3

Henry, R. J. (2015). Barley: harvesting, storage, and transport. Encyclopedia of food grains. (pp. 50-53) edited by Colin Wrigley, Harold Corke, Koushik Seetharaman and Jon Faubion. Kidlington, Oxford, United Kingdom: Elsevier. doi: 10.1016/B978-0-12-394437-5.00180-7

Krishnan, S. Gopala, Waters, Daniel L. E. and Henry, Robert J. (2014). A method for discovery of pair wise genome-wide SNP variations from whole genome re-sequencing data. Cereal Genomics: Methods and Protocols. (pp. 287-294) edited by Robert J. Henry and Agnelo Furtado. New York, NY United States: Humana Press. doi: 10.1007/978-1-62703-715-0_24

Henry, Robert J., Rice, Nicole, Edwards, Mark and Nock, Catherine J. (2014). Next-generation technologies to determine plastid genome sequences. Chloroplast Biotechnology: Methods and Protocols. (pp. 39-46) edited by Pal Maliga. New York, NY, United States: Humana Press. doi: 10.1007/978-1-62703-995-6_2

Healey, Adam, Furtado, Agnelo and Henry, Robert J. (2014). Structural genomics of eucalypts. Genetics, genomics and breeding of eucalypts. (pp. 103-120) edited by Robert Henry and Chittaranjan Kole. Boca Raton, FL, United States: CRC Press. doi: 10.1201/b17154

Henry, Robert (2014). Eucalypts. Genetics, genomics and breeding of eucalypts. (pp. 1-11) edited by Robert Henry and Chittaranjan Kole. Boca Raton, FL, United States: CRC Press.

Henry, Robert J. (2014). Eucalypts. Genetics, Genomics and Breeding of Eucalypts. (pp. 1-11) Boca Raton FL, United States: CRC Press. doi: 10.1201/b17154

Henry, Robert J. and Kole, Chittaranjan (2014). Preface to the volume. Genetics, genomics and breeding of eucalypts . (pp. xi-xi) Boca Raton FL, United States: CRC Press. doi: 10.1201/b17154

Henry, Robert J. and Furtado, Agnelo (2014). Preface. Cereal genomics: methods and protocols. (pp. v-v) New York, NY, United States: Humana Press.

Lybbert, Travis J., Skerritt, John H. and Henry, Robert J. (2013). Facilitation of future research and extension through funding and networking support. Concepts and Strategies. (pp. 415-432) edited by Chittaranjan Kole. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-37045-8

Henry, Robert J. (2013). Implications of advances in molecular genetic technology for food security and ownership. The Intellectual Property and Food Project: From Rewarding Innovation and Creation to Feeding the World. (pp. 11-20) edited by Charles Lawson and Jay Sanderson. Farnham, Surrey, England: Ashgate Publishing.

Henry, Robert J. (2012). Evolution of DNA marker technology in plants. Molecular markers in plants. (pp. 1-19) edited by Robert J. Henry. Hoboken NJ, United States: Blackwell Publishing Ltd.. doi: 10.1002/9781118473023.ch1

Henry, Robert J. (2012). Genomics for bioenergy production. Handbook of bioenergy crop plants. (pp. 21-29) edited by Chittaranjan Kole, Chandrashekhar P. Joshi and David R. Shonnard. Boca Raton, FL, United States: CRC Press. doi: 10.1201/b11711-4

Krishnan, Gopala S., Singh, A. K., Waters, Daniel L. E. and Henry, Robert J. (2012). Molecular Markers for Harnessing Heterosis. Molecular Markers in Plants. (pp. 119-136) edited by Robert J. Henry. Hoboken NJ, United States: John Wiley and Sons. doi: 10.1002/9781118473023.ch8

Jackson, P. and Henry, R. J. (2011). Erianthus. Industrial Crops. (pp. 97-107) Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-21102-7_5

Anzoua, Kossonou Guillaume, Yamanda, Toshihiko and Henry, Robert J. (2011). Miscanthus. Industrial Crops. (pp. 157-164) edited by Chittaranjan Kole. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-21102-7_9

Bonnett, G. D. and Henry, R. J. (2011). Saccharum. Industrial Crops. (pp. 165-177) edited by Chittaranjan Kole. Heidelberg: Springer. doi: 10.1007/978-3-642-21102-7_10

Henry, Robert J. (2011). Eucalyptus. Forest Trees. (pp. 65-75) edited by Chittaranjan Kole. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-21250-5_4

Bhattacharya, Anjanabha, Rice, Nicole, Shapter, Frances M., Norton, Sally L. and Henry, Robert J. (2011). Sorghum. Cereals. (pp. 397-406) edited by Chittaranjan Kole. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-14228-4_9

Henry, R. J. (2010). An overview of advances in genomics in the new millennium. Principles and practices of plant genomics. Volume 3, Advanced genomics. (pp. 1-23) edited by Chittaranjan Kole and Albert G. Abbott. Enfield, N.H., U.S.: Taylor & Francis.

Henry, Robert J. (2010). Basic information on the sugarcane plant. Genetics, Genomics and Breeding of Sugarcane. (pp. 1-7) Boca Raton FL, United States: CRC Press. doi: 10.1201/EBK1578086849

Brijs, K., Courtin, C,, Goesaert, H., Gebruers, K., Delcour, J., Shewry, P., Henry, R. J., Nicolas, J., Potus, J., Garcia, R. and Davidou, S. (2009). Enzymes and enzyme inhibitors endogenous to wheat. Wheat : Chemistry and Technology. (pp. 401-435) St. Paul, MN, U.S.A.: AACC International. doi: 10.1016/B978-1-891127-55-7.50018-5

Eliott, F., Cordeiro, G., Bundock, P. C. and Henry, R. J. (2008). SNP discovery by ecotilling using capillary electrophoresis. Plant genotyping II: SNP technology. (pp. 78-87) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0078

Bradbury, Louis M.E., Henry, Robert J. and Waters, Daniel L. E. (2008). Flavor development in rice. Biotechnology in flavor production. (pp. 130-146) edited by Daphna Havkin-Frenkel and Faith C. Belanger. Oxford, United Kingdom: Blackwell. doi: 10.1002/9781444302493.ch6

Henry, R. J. (2008). Future prospects for plant genotyping. Plant genotyping II: SNP technology. (pp. 272-280) edited by R.J. Henry. Wallingford, United Kingdom: CAB International. doi: 10.1079/9781845933821.0272

Henry, R. J. (2008). Preface. Plant genotyping II: SNP technology. (pp. IX-IX) edited by R.J. Henry. Wallingford, United Kingdom: CAB International.

Waters, D. L. E., Bundock, P. C. and Henry, R. J. (2008). Genotyping by allele-specific PCR. Plant genotyping II: SNP technology. (pp. 88-97) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0088

Rice, N., Kasem, S. and Henry, R. J. (2008). DNA banks as a resource for SNP genotyping. Plant genotyping II: SNP technology. (pp. 207-218) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0207

Kasem, S., Rice, N. and Henry, R. J. (2008). DNA extraction from plant tissue. Plant genotyping II: SNP technology. (pp. 219-271) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0219

Bradbury, L. M. T., Waters, D. L. E. and Henry, R. J. (2008). Genotyping for rice eating qualities. Plant genotyping II: SNP technology. (pp. 187-194) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0187

Henry, R. J. and Ablett, G. (2008). Sequence polymorphisms in the flanking regions of microsatellite markers. Plant genotyping II: SNP technology. (pp. 68-77) edited by R. J. Henry. Wallingford, United Kingdom: CAB International. doi: 10.1079/9781845933821.0068

Pattemore, J. A., Trau, M. and Henry, R. J. (2008). Nanotechnology : the future of cost-effective plant genotyping. Plant genotyping II : SNP technology. (pp. 133-153) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0133

Riaz, S., Doligez, A., Henry, R. J. and Walker, M. A. (2007). Grapes. Fruits and Nuts. (pp. 63-94) edited by Chittaranjan Kole. Berlin, Germany: Springer.

Cordeiro, Giovanni, Amouyal, Ouzi, Eliott, Frances and Henry, Robert (2007). Sugarcane. Pulses, Sugar and Tuber Crops. (pp. 175-204) edited by Chittaranjan Kole. Berlin, Germany: Springer. doi: 10.1007/978-3-540-34516-9_11

Rice, Nicole, Henry, Robert and Rossetto, Maurizio (2006). DNA banks : A primary resource for conservation research. DNA banks : Providing novel options for genebanks?. (pp. 41-48) edited by M.C. de Vicente and M.S. Andersson. Rome, Italy: International Plant Genetic Resources Institute.

Henry, Robert J. (2006). Plant conservation genetics : Importance, options, and opportunities. Plant conservation genetics. (pp. 1-6) edited by Robert J. Henry. New York, N.Y., U.S.A.: Food Products Press.

Henry, Robert J. (2006). Genomics and plant biodiversity management. Plant conservation genetics. (pp. 167-175) edited by Robert J. Henry. New York, N.Y., U.S.A.: Food Products Press.

Henry, Robert J. (2005). Importance of plant diversity. Plant diversity and evolution : Genotypic and phenotypic variation in higher plants. (pp. 1-5) edited by Robert J. Henry. Wallingford, Oxfordshire, UK ; Cambridge, MA: CABI Publishing.

Henry, Robert J. (2005). Conserving genetic diversity in plants of environmental, social or economic importance. Plant diversity and evolution : Genotypic and phenotypic variation in higher plants. (pp. 317-325) edited by Robert J. Henry. Wallingford, Oxfordshire, UK ; Cambridge, MA: CABI Publishing.

Henry, R.J. (2004). Who owns the gene pool. Emerging challenges for farming systems: Lessons from Australian and Dutch agriculture. (pp. 130-144) edited by Ken G. Rickert and Rural Industries Research and Development Corporation (Australia). Canberra ACT, Australia: RIRDC.

Henry, R. J. (2004). Barley: Harvesting storage and transport. Encyclopedia of grain sciences. (pp. 46-49) edited by Colin Wrigley, Harold Corke and Charles E. Walker. Amsterdam, Netherlands; Boston, MA, United States: Elseiver. doi: 10.1016/B0-12-765490-9/00012-4

McLauchlan, A., Henry, R. J., Isaac, P. G. and Edwards, K.J. (2001). Microsatellite analysis in cultivated hexaploid wheat and wild wheat relatives. Plant genotyping: The DNA fingerprinting of plants. (pp. 147-159) edited by R. J. Henry. Oxford, United Kingdom: CABI Publishing.

Henry, R. J. and Lee, L. S. (2001). Commercial applications of plant genotyping. Plant Genotyping: the DNA Fingerprinting of Plants. (pp. 265-273) Oxford: CABI.

Henry, R. J. (2001). Plant DNA extraction. Plant Genotyping: the DNA Fingerprinting of Plants. (pp. 239-249) Oxford: CABI.

Henry, R. J. (2001). Biotechnology: cereal and cereal products quality. Cereals Processing Technology. (pp. 53-76) Abington, Oxfordshire, UK: Woodhead Publishing.

Henry, R. J. (2001). Exploiting Cereal Genetic Resources. Biotechnology of Cereals. (pp. 23-57) London: Academia Press. doi: 10.1016/S0065-2296(01)34006-5

Henry, R. J., Lee, L. S., Rossetto, M. and Homer. L. (2001). Molecular analysis of wild plant germplasm: The case of tea tree (Melaleuca alternifolia). Plant genotyping: The DNA fingerprinting of plants. (pp. 95-107) edited by R. J. Henry. New York, NY United States: CABI.

Henry, R. J., Morris, P. C. and Bryce, J. H. (2000). Using biotechnology to add value to cereals. Cereal Biotechnology. (pp. 91-106) Cambridge: Woodhead.

Henry, R. J., Chopra, V. L., Malik, V. S. and Bhat, S. R. (1999). Molecular techniques for the identification of plants. Applied plant biotechnology. (pp. 269-283) Enfield, NH, United Kingdom: Science Publishers.

Henry, Robert J. (1999). Molecular techniques for the identification of plants. Applied plant biotechnology. (pp. 269-283) edited by Chopra, V. L., Malik, V. S. and Bhat, S. R.. Enfield, NH: Science Publishers.

Henry, R. J. (1998). Molecular and biochemical characterization of somaclonal variation. Somaclonal variation and induced mutations in crop improvement. (pp. 485-499) Dordrecht, Netherlands: Kluwer Academic Publishers.

Graham, G. C. and Henry, R. J. (1997). Preparation of fungal genomic DNA for PCR and RAPD analysis. Fingerprinting methods based upon arbitrarily primed PCR. (pp. 29-34) edited by Maria R. Micheli and Rodolfo Bova. Berlin, Germany: Springer.

Xu, Xiuming, Huang, Hechen, Lin, Shaoqing, Zhou, Linwei, Yi, Yuchong, Lin, Enwen, Feng, Liqing, Zheng, Yu, Lin, Aiting, Yu, Liying, Shen, Yingjia, Henry, Robert J. and Fang, Jingping (2024). Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae and Jasminum species. BMC Plant Biology, 24 (1) 331. doi: 10.1186/s12870-024-04995-9

Wang, Ya, Dong, Wei, Liang, Yufan, Lin, Weiwei, Chen, Junhao, Henry, Robert and Chen, Fei (2024). PhyloForge: Unifying Micro‐ and Macroevolution With Comprehensive Genomic Signals. Molecular Ecology Resources. doi: 10.1111/1755-0998.14050

Wilkinson, Melanie J., McLay, Kathleen, Kainer, David, Elphinstone, Cassandra, Dillon, Natalie L., Webb, Matthew, Wijesundara, Upendra K., Ali, Asjad, Bally, Ian S. E., Munyengwa, Norman, Furtado, Agnelo, Henry, Robert J., Hardner, Craig M. and Ortiz‐Barrientos, Daniel (2024). Centromeres are hotspots for chromosomal inversions and breeding traits in mango. New Phytologist. doi: 10.1111/nph.20252

Zheng, Xiaoming, Peng, Youlin, Qiao, Jiyue, Henry, Robert and Qian, Qian (2024). Wild rice: unlocking the future of rice breeding. Plant Biotechnology Journal, 22 (11), 3218-3226. doi: 10.1111/pbi.14443

Manatunga, Sachini Lakmini, Furtado, Agnelo, Topp, Bruce, Alam, Mobashwer, Mason, Patrick J., Kharabian-Masouleh, Ardashir and Henry, Robert J. (2024). Analysis of phylogenetic relationships in Macadamia shows evidence of extensive reticulate evolution. Frontiers in Plant Science, 15 ARTN 1394244. doi: 10.3389/fpls.2024.1394244

Nakandala, Upuli, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Mason, Patrick, Williams, Darren C. and Henry, Robert J. (2024). The genomes of Australian wild limes. Plant Molecular Biology, 114 (5) 102, 102. doi: 10.1007/s11103-024-01502-4

Fang, Jingping, Lin, Aiting, Yan, Hansong, Feng, Liqing, Lin, Shaoqing, Mason, Patrick, Zhou, Linwei, Xu, Xiuming, Zhao, Kai, Huang, Yongji and Henry, Robert J. (2024). Cytoplasmic genomes of Jasminum sambac reveal divergent sub-mitogenomic conformations and a large nuclear chloroplast-derived insertion. BMC Plant Biology, 24 (1) 861. doi: 10.1186/s12870-024-05557-9

Mason, Patrick John, Blaakmeer, Anko, Furtado, Agnelo, Stuart, Peter Norman, Nomula, Rajesh, Bjarnholt, Nanna, Sørensen, Mette, Koleva, Donka Teneva, Pedas, Pai Rosager, Knudsen, Søren, Møller, Birger Lindberg, Skadhauge, Birgitte and Henry, Robert James (2024). Harnessing the Power of an Extensive EMS‐Induced Sorghum Population for Rapid Crop Improvement. Physiologia Plantarum, 176 (4) e14449, 1-9. doi: 10.1111/ppl.14449

Ha, D. T., Ha, P. T. T., Tuyen, P. T., Henry, R. J., Loi, T. T. and Chi, T. N. (2024). Polyphenol content, antioxidant properties and trypsin inhibition activity of methanol seed extract and fractions of White Velvet bean from Vietnam. Legume Research, 47 (5), 772-778. doi: 10.18805/LRF-783

Nakandala, Upuli, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Williams, Darren C. and Henry, Robert J. (2024). The genome of Citrus australasica reveals disease resistance and other species specific genes. BMC Plant Biology, 24 (1) 260, 260. doi: 10.1186/s12870-024-04988-8

Li, Xin, Li, Bairu, Gu, Shaobin, Pang, Xinyue, Mason, Patrick, Yuan, Jiangfeng, Jia, Jingyu, Sun, Jiaju, Zhao, Chunyan and Henry, Robert (2024). Single-cell and spatial RNA sequencing reveal the spatiotemporal trajectories of fruit senescence. Nature Communications, 15 (1) 3108, 1-19. doi: 10.1038/s41467-024-47329-x

Toyomoto, Daiki, Shibata, Yukika, Uemura, Masato, Taura, Satoru, Sato, Tadashi, Henry, Robert, Ishikawa, Ryuji and Ichitani, Katsuyuki (2024). Seed abortion caused by the combination of two duplicate genes in the progeny from the cross between Oryza sativa and Oryza meridionalis. Breeding Science, 74 (2) 23084, 1-13. doi: 10.1270/jsbbs.23084

Rangan, Parimalan, Furtado, Agnelo, Chinnusamy, Viswanathan and Henry, Robert (2024). A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome data. BioSystems, 238 105195, 105195. doi: 10.1016/j.biosystems.2024.105195

Salojärvi, Jarkko, Rambani, Aditi, Yu, Zhe, Guyot, Romain, Strickler, Susan, Lepelley, Maud, Wang, Cui, Rajaraman, Sitaram, Rastas, Pasi, Zheng, Chunfang, Muñoz, Daniella Santos, Meidanis, João, Paschoal, Alexandre Rossi, Bawin, Yves, Krabbenhoft, Trevor J., Wang, Zhen Qin, Fleck, Steven J., Aussel, Rudy, Bellanger, Laurence, Charpagne, Aline, Fournier, Coralie, Kassam, Mohamed, Lefebvre, Gregory, Métairon, Sylviane, Moine, Déborah, Rigoreau, Michel, Stolte, Jens, Hamon, Perla, Couturon, Emmanuel ... Descombes, Patrick (2024). The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars. Nature Genetics, 56 (4) ARTN s41588-024-01695-w, 721-731. doi: 10.1038/s41588-024-01695-w

Healey, A. L., Garsmeur, O., Lovell, J. T., Shengquiang, S., Sreedasyam, A., Jenkins, J., Plott, C. B., Piperidis, N., Pompidor, N., Llaca, V., Metcalfe, C. J., Doležel, J., Cápal, P., Carlson, J. W., Hoarau, J. Y., Hervouet, C., Zini, C., Dievart, A., Lipzen, A., Williams, M., Boston, L. B., Webber, J., Keymanesh, K., Tejomurthula, S., Rajasekar, S., Suchecki, R., Furtado, A., May, G., Parakkal, P. ... D’Hont, A. (2024). The complex polyploid genome architecture of sugarcane. Nature, 628 (8009), 1-7. doi: 10.1038/s41586-024-07231-4

Wijesundara, Upendra Kumari, Masouleh, Ardashir Kharabian, Furtado, Agnelo, Dillon, Natalie L. and Henry, Robert J. (2024). A chromosome‐level genome of mango exclusively from long‐read sequence data. The Plant Genome, 17 (2) e20441, e20441. doi: 10.1002/tpg2.20441

Dhondge, Harshal V., Barvkar, Vitthal T., Dastager, Syed G., Dharne, Mahesh S., Rajput, Vinay, Pable, Anupama A., Henry, Robert J. and Nadaf, Altafhusain B. (2024). Genome sequencing and protein modeling unraveled the 2AP biosynthesis in Bacillus cereus DB25. International Journal of Food Microbiology, 413 110600, 110600. doi: 10.1016/j.ijfoodmicro.2024.110600

Al-Dossary, Othman, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2024). Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stress. Current Plant Biology, 37 100311, 100311. doi: 10.1016/j.cpb.2023.100311

Zheng, Xiaoming, Ratnasekera, Disna, Fan, Jiayu, Henry, Robert J., Song, Beng-Kah, Olsen, Kenneth M., Joshi, Bal Krishna, Banaticla-Hilario, Maria Celeste N., Pusadee, Tonapha, Melaku, Adane Getachew, Estelle Loko, Yêyinou Laura, Vilayheuang, Koukham, Oppong, Gavers K., Poku, Samuel Aduse, Wambugu, Peterson W., Ge, Song, Junior, Aldo Merotto, Aung, Ohn Mar, Venuprasad, Ramaiah, Kohli, Ajay, Zhou, Wenbin and Qian, Qian (2024). Global Wild Rice Germplasm Resources Conservation Alliance: WORLD WILD-RICE WIRING. Molecular Plant, 17 (4), 516-518. doi: 10.1016/j.molp.2024.03.001

Okemo, Pauline, Wijesundra, Upendra, Nakandala, Upuli, Dillon, Natalie, Chandora, Rahul, Campbell, Bradley, Smith, Millicent, Hardner, Craig, Cadorna, Charles A., Martin, Guillaume, Yahiaoui, Nabila, Garsmeur, Olivier, Pompidor, Nicolas, D’Hont, Angelique and Henry, Robert J. (2024). Crop domestication in the Asia Pacific region: a review. Agriculture Communications, 2 (1) 100032, 100032. doi: 10.1016/j.agrcom.2024.100032

Abdullah, Muhammad, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Okemo, Pauline and Henry, Robert (2024). An improved haplotype resolved genome reveals more rice genes. Tropical Plants, 3 (1). doi: 10.48130/tp-0024-0007

Wijesundara, Upendra Kumari, Furtado, Agnelo, Dillon, Natalie L., Masouleh, Ardashir Kharabian and Henry, Robert J (2024). Phylogenetic relationships in the genus <i>Mangifera</i> based on whole chloroplast genome and nuclear genome sequences. Tropical Plants, 1-16. doi: 10.48130/tp-0024-0031

Sharma, Priyanka, Masouleh, Ardashir Kharabian, Constantin, Lena, Topp, Bruce, Furtado, Agnelo and Henry, Robert J. (2024). Genome sequences to support conservation and breeding of <i>Macadamia</i>. Tropical Plants, 1-11. doi: 10.48130/tp-0024-0029

Pham, Cuong Hung, Do, Tuyen Duc, Nguyen, Hoa Thi Lan, Hoang, Nga Thi, Tran, Trung Duc, Vu, Mi Thi Thao, Doi, Hanh Hong, Bui, Thu-Giang Thi and Henry, Robert James (2024). Genome-wide association mapping of genes for anthocyanin and flavonoid contents in Vietnamese landraces of black rice. Euphytica, 220 (1) 11. doi: 10.1007/s10681-023-03268-0

Westaway, Michael C., Wright, Nathan, Crowther, Alison, Silcock, Jennifer, Carter, Rodney, Moss, Patrick and Henry, Robert (2023). Transdisciplinary approaches to understanding past Australian Aboriginal foodways. Archaeology of Food and Foodways, 2 (1), 47-74. doi: 10.1558/aff.18161

Ha, P. T.T., Tran, N. T.B., Tuyen, P. T., Mason, P., Henry, R. J. and Loi, T. T. (2023). The effects of UV light and methyl salicylate on phytochemical constituents and nutritional traits in common bean (Phaseolus vulgaris L.). Legume Research, 46 (12) LRF-754, 1597-1603. doi: 10.18805/LRF-754

Al-Dossary, Othman, Furtado, Agnelo, KharabianMasouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2023). Long read sequencing to reveal the full complexity of a plant transcriptome by targeting both standard and long workflows. Plant Methods, 19 (1) 112. doi: 10.1186/s13007-023-01091-1

Ha, P. T. T., Hiep, T. T. M., Thai, H. N., Liem, N. T., Thuy, D. T. K. and Henry, R. J. (2023). Assessment of the physical, chemical, yield and nutritional quality traits of tropical, temperate and wild dry bean species in Vietnam. Legume Research, 46 (11) LRF-751, 1413-1421. doi: 10.18805/LRF-751

Kharabian-Masouleh, Ardashir, Furtado, Agnelo, Alsubaie, Bader, Al-Dossary, Othman, Wu, Alex, Al-Mssalem, Ibrahim and Henry, Robert (2023). Loss of plastid ndh genes in an autotropic desert plant. Computational and Structural Biotechnology Journal, 21, 5016-5027. doi: 10.1016/j.csbj.2023.10.023

Tran, Thien khanh, Ha, Pham Thi Thu, Henry, Robert. J., Nguyen, Dang Nguyen Thao, Tuyen, Phung Thi and Liem, Nguyen Thanh (2023). Polyphenol contents, gas chromatography-mass spectrometry (GC–MS) and antibacterial activity of methanol extract and fractions of Sonneratia caseolaris fruits from Ben Tre Province in Vietnam. Journal of Microbiology and Biotechnology, 34 (1), 94-102. doi: 10.4014/jmb.2304.04019

Alsubaie, Bader, Kharabian-Masouleh, Ardashir, Furtado, Agnelo, Al-Dossary, Othman, Al-Mssallem, Ibrahim and Henry, Robert J. (2023). Highly sex specific gene expression in Jojoba. BMC Plant Biology, 23 (1) 440, 440. doi: 10.1186/s12870-023-04444-z

Sudan, Jebi, Urwat, Uneeb, Farooq, Asmat, Pakhtoon, Mohammad Maqbool, Zaffar, Aaqif, Naik, Zafir Ahmad, Batool, Aneesa, Bashir, Saika, Mansoor, Madeeha, Sofi, Parvaze A., Sofi, Najeebul Ul Rehman, Shikari, Asif B., Khan, Mohd Kamran, Hossain, Mohammad Anwar, Henry, Robert J. and Zargar, Sajad Majeed (2023). Explicating genetic architecture governing nutritional quality in pigmented rice. PeerJ, 9 e15901, 1-29. doi: 10.7717/peerj.15901

Wijerathna‐Yapa, Akila, Henry, Robert J., Dunn, Matt and Beveridge, Christine A. (2023). Science and opinion in decision making: a case study of the food security collapse in Sri Lanka. Modern Agriculture, 1 (2), 142-151. doi: 10.1002/moda.18

Thirugnanasambandam, Prathima Perumal, Singode, Avinash, Thalambedu, Lakshmi Pathy, Athiappan, Selvi, Krishnasamy, Mohanraj, Purakkal, Sobhakumari Valiya, Govind, Hemaprabha, Furtado, Agnelo and Henry, Robert (2023). Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum. Frontiers in Plant Science, 14 1199748, 1-15. doi: 10.3389/fpls.2023.1199748

Rangan, Parimalan, Henry, Robert, Wambugu, Peterson and Periyannan, Sambasivam (2023). Editorial: Plant genetic and genomic resources for sustained crop improvement. Frontiers in Plant Science, 14 1266698, 1-3. doi: 10.3389/fpls.2023.1266698

Li, Yimeng, Liang, Chao, Liu, Junfeng, Zhou, Chanchan, Wu, Zhouzhou, Guo, Shimeng, Liu, Jiaxin, A, Na, Wang, Shu, Xin, Guang and Henry, Robert J. (2023). Moderate reduction in nitrogen fertilizer results in improved rice quality by affecting starch properties without causing yield loss. Foods, 12 (13) 2601, 1-22. doi: 10.3390/foods12132601

Rangan, Parimalan, Pradheep, Kanakasabapathi, Archak, Sunil, Smýkal, Petr and Henry, Robert (2023). Editorial: genomics and phenomics of crop wild relatives (CWRs) for crop improvement. Frontiers in Plant Science, 14 1221601, 1-2. doi: 10.3389/fpls.2023.1221601

Nakandala, Upuli, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Furtado, Agnelo, Mason, Patrick, Constantin, Lena and Henry, Robert J. (2023). Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes. Horticulture Research, 10 (05) uhad058, 1-14. doi: 10.1093/hr/uhad058

Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2023). Analysis of domestication loci in wild rice populations. Plants, 12 (3) 489, 1-14. doi: 10.3390/plants12030489

Anirban, Apurba, Hayward, Alice, Hong, Hung T., Masouleh, Ardashir Kharabian, Henry, Robert J. and O'Hare, Tim J. (2023). Breaking the tight genetic linkage between the a1 and sh2 genes led to the development of anthocyanin-rich purple-pericarp super-sweetcorn. Scientific Reports, 13 (1) 1050, 1-13. doi: 10.1038/s41598-023-28083-4

Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2023). Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids). BMC Genomics, 24 (1) 18, 1-18. doi: 10.1186/s12864-023-09124-8

Henry, Robert J. (2023). Genomic characterization supporting the development of new food and crop options from the Australian flora. Sustainable Food Technology, 1 (3), 337-347. doi: 10.1039/d3fb00001j

Anirban, Apurba, Masouleh, Ardashir Kharabian, Henry, Robert J. and O’Hare, Tim J. (2023). Sequence variations associated with novel purple-pericarp super-sweetcorn compared to its purple-pericarp maize and white super-sweetcorn parents. Molecular Genetics and Genomics, 298 (6), 1395-1405. doi: 10.1007/s00438-023-02060-y

Nakandala, Upuli, Furtado, Agnelo, Smith, Malcolm W., Williams, Darren C. and Henry, Robert J. (2023). Phylogenetic relationships among Australian native citrus species based upon complete chloroplast genomes and single copy nuclear genes. Tropical Plants, 2, 1-8. doi: 10.48130/tp-2023-0021

Ananda, Galaihalage K. S., Norton, Sally L., Barnes, Eve, Furtado, Agnelo, Møller, Birger Lindberg, Gleadow, Roslyn and Henry, Robert J. (2022). Variant analysis of grain size related genes in the genus Sorghum. Genetic Resources and Crop Evolution, 70 (5), 1377-1394. doi: 10.1007/s10722-022-01508-1

Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2022). Gene expression in the developing seed of wild and domesticated rice. International Journal of Molecular Sciences, 23 (21) 13351, 1-21. doi: 10.3390/ijms232113351

MacDonald, Hamish and Henry, Robert J. (2022). Balancing incentives for innovation in new plant varieties. Nature Plants, 8 (11), 1206-1208. doi: 10.1038/s41477-022-01246-3

Perlo, Virginie, Furtado, Agnelo, Botha, Frederik C., Margarido, Gabriel R. A., Hodgson‐Kratky, Katrina, Choudhary, Hemant, Gladden, John, Simmons, Blake and Henry, Robert J. (2022). Transcriptome and metabolome integration in sugarcane through culm development. Food and Energy Security, 11 (4) e421, 1-16. doi: 10.1002/fes3.421

Nath, Onkar, Fletcher, Stephen J., Hayward, Alice, Shaw, Lindsay M., Kharabian Masouleh, Ardashir, Furtado, Agnelo, Henry, Robert J. and Mitter, Neena (2022). A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes. Horticulture Research, 9 uhac157, 1-10. doi: 10.1093/hr/uhac157

Henry, Robert J. (2022). Progress in Plant Genome Sequencing. Applied Biosciences, 1 (2), 113-128. doi: 10.3390/applbiosci1020008

Badoni, Saurabh, Parween, Sabiha, Henry, Robert J. and Sreenivasulu, Nese (2022). Systems seed biology to understand and manipulate rice grain quality and nutrition. Critical Reviews in Biotechnology, 43 (5), 716-733. doi: 10.1080/07388551.2022.2058460

Hasan, Sharmin, Huang, Lichun, Liu, Qiaoquan, Perlo, Virginie, O'Keeffe, Angela, Margarido, Gabriel Rodrigues Alves, Furtado, Agnelo and Henry, Robert J (2022). The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts. Rice, 15 (1) 29, 29. doi: 10.1186/s12284-022-00577-1

Rangan, Parimalan, Wankhede, Dhammaprakash P., Subramani, Rajkumar, Chinnusamy, Viswanathan, Malik, Surendra K., Baig, Mirza Jaynul, Singh, Kuldeep and Henry, Robert (2022). Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae. Photosynthesis Research, 153 (3), 125-134. doi: 10.1007/s11120-022-00926-7

Yap, Jia-Yee Samantha, Rossetto, Maurizio, Das, Sourav, Wilson, Peter D., Beaumont, Linda J. and Henry, Robert J. (2022). Tracking habitat or testing its suitability? Similar distributional patterns can hide very different histories of persistence versus nonequilibrium dynamics. Evolution, 76 (6), 1209-1228. doi: 10.1111/evo.14460

Correr, Fernando Henrique, Furtado, Agnelo, Franco Garcia, Antonio Augusto, Henry, Robert James and Rodrigues Alves Margarido, Gabriel (2022). Allele expression biases in mixed-ploid sugarcane accessions. Scientific Reports, 12 (1) 8778, 1-10. doi: 10.1038/s41598-022-12725-0

Zhao, Yingting, Henry, Robert J. and Gilbert, Robert G. (2022). Testing the linearity assumption for starch structure-property relationships in rices. Frontiers in Nutrition, 9 916751, 1-16. doi: 10.3389/fnut.2022.916751

Chourasia, Vallari R., Bisht, Meena, Pant, Kamal K. and Henry, Robert J. (2022). Unveiling the potential of water as a co-solvent in microwave-assisted delignification of sugarcane bagasse using ternary deep eutectic solvents. Bioresource Technology, 351 127005, 1-10. doi: 10.1016/j.biortech.2022.127005

Abdullah, Muhammad, Okemo, Pauline, Furtado, Agnelo and Henry, Robert (2022). Potential of genome editing to capture diversity from Australian wild rice relatives. Frontiers in Genome Editing, 4 875243. doi: 10.3389/fgeed.2022.875243

Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2022). Reticulate evolution in AA-genome wild rice in Australia. Frontiers in Plant Science, 13 767635, 767635. doi: 10.3389/fpls.2022.767635

Perlo, Virginie, Margarido, Gabriel R. A., Botha, Frederik C., Furtado, Agnelo, Hodgson-Kratky, Katrina, Correr, Fernando H. and Henry, Robert J. (2022). Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content. Theoretical and Applied Genetics, 135 (5), 1619-1636. doi: 10.1007/s00122-022-04058-3

Wambugu, Peterson W. and Henry, Robert (2022). Supporting in situ conservation of the genetic diversity of crop wild relatives using genomic technologies. Molecular Ecology, 31 (8), 2207-2222. doi: 10.1111/mec.16402

Henry, Robert J. (2022). Applied biosciences: application of biological science and technology. Applied Biosciences, 1 (1), 38-39. doi: 10.3390/applbiosci1010002

Zhao, Yingting, Smyth, Heather E., Tao, Keyu, Henry, Robert J. and Gilbert, Robert G. (2022). Starch molecular structural features and volatile compounds affecting the sensory properties of polished Australian wild rice. Foods, 11 (4) 511, 511. doi: 10.3390/foods11040511

Ichitani, Katsuyuki, Toyomoto, Daiki, Uemura, Masato, Monda, Kentaro, Ichikawa, Makoto, Henry, Robert, Sato, Tadashi, Taura, Satoru and Ishikawa, Ryuji (2022). New hybrid spikelet sterility gene found in interspecific cross between Oryza sativa and O. meridionalis. Plants, 11 (3) 378, 378. doi: 10.3390/plants11030378

Ananda, Galaihalage K. S., Norton, Sally L., Blomstedt, Cecilia, Furtado, Agnelo, Møller, Birger Lindberg, Gleadow, Roslyn and Henry, Robert J. (2022). Transcript profiles of wild and domesticated sorghum under water-stressed conditions and the differential impact on dhurrin metabolism. Planta, 255 (2) 51, 51. doi: 10.1007/s00425-022-03831-4

Nath, Onkar, Fletcher, Stephen J., Hayward, Alice, Shaw, Lindsay M., Agarwal, Rimjhim, Furtado, Agnelo, Henry, Robert J. and Mitter, Neena (2022). A comprehensive high-quality DNA and RNA extraction protocol for a range of cultivars and tissue types of the woody crop avocado. Plants, 11 (3) 242, 242. doi: 10.3390/plants11030242

Cowan, Max, Møller, Birger Lindberg, Norton, Sally, Knudsen, Camilla, Crocoll, Christoph, Furtado, Agnelo, Henry, Robert, Blomstedt, Cecilia and Gleadow, Roslyn M. (2022). Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype. Genes, 13 (1) 140, 1-17. doi: 10.3390/genes13010140

Islam, Md Jahirul, Uddin, Md Jalal, Hossain, Mohammad Anwar, Henry, Robert, Begum, Mst. Kohinoor, Sohel, Md. Abu Taher, Mou, Masuma Akter, Ahn, Juhee, Cheong, Eun Ju and Lim, Young-Seok (2022). Exogenous putrescine attenuates the negative impact of drought stress by modulating physio-biochemical traits and gene expression in sugar beet (Beta vulgaris L.). PLoS One, 17 (1) e0262099, e0262099. doi: 10.1371/journal.pone.0262099

Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2022). Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids). Current Research in Biotechnology, 4, 167-178. doi: 10.1016/j.crbiot.2022.02.005

Rodrigues Alves Margarido, Gabriel, Correr, Fernando Henrique, Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2021). Limited allele-specific gene expression in highly polyploid sugarcane. Genome Research, 32 (2), 297-308. doi: 10.1101/gr.275904.121

Henry, Robert J. (2021). Wild rice research: advancing plant science and food security. Molecular Plant, 15 (4), 1-3. doi: 10.1016/j.molp.2021.12.006

Sharma, Priyanka, Murigneux, Valentine, Haimovitz, Jasmine, Nock, Catherine J., Tian, Wei, Kharabian Masouleh, Ardashir, Topp, Bruce, Alam, Mobashwer, Furtado, Agnelo and Henry, Robert J. (2021). The genome of the endangered Macadamia jansenii displays little diversity but represents an important genetic resource for plant breeding. Plant Direct, 5 (12) e364, e364. doi: 10.1002/pld3.364

O’Connor, Daniel J., Meder, Roger, Furtado, Angelo, Henry, Robert J., Wright, Graeme C. and Rachaputi, Rao C.N. (2021). Single kernel sorting of high and normal oleic acid peanuts using near infrared spectroscopy. Journal of Near Infrared Spectroscopy, 29 (6), 366-370. doi: 10.1177/09670335211053502

Sharma, Priyanka, Kharabian Masouleh, Ardashir, Topp, Bruce, Furtado, Agnelo and Henry, Robert J. (2021). Denovo chromosome level assembly of a plant genome from long read sequence data. The Plant Journal, 109 (3), 727-736. doi: 10.1111/tpj.15583

Zhao, Yingting, Henry, Robert J. and Gilbert, Robert G. (2021). Starch structure-property relations in Australian wild rices compared to domesticated rices. Carbohydrate Polymers, 271 118412, 1-10. doi: 10.1016/j.carbpol.2021.118412

Vanambathina, Prameela, Henry, Robert J., Rachaputi, Rao C. N. and Furtado, Agnelo (2021). Secondary genepool of Australian Cajanus species contains sources of resistance to Helicoverpa armigera (Hübner). Annals of Applied Biology, 180 (2), 259-272. doi: 10.1111/aab.12730

Chourasia, Vallari R., Pandey, Ashish, Pant, Kamal Kishore and Henry, Robert J. (2021). Improving enzymatic digestibility of sugarcane bagasse from different varieties of sugarcane using deep eutectic solvent pretreatment. Bioresource Technology, 337 125480, 125480. doi: 10.1016/j.biortech.2021.125480

Al‐Dossary, Othman, Alsubaie, Bader, Kharabian‐Masouleh, Ardashir, Al‐Mssallem, Ibrahim, Furtado, Agnelo and Henry, Robert J (2021). The jojoba genome reveals wide divergence of the sex chromosomes in a dioecious plant. The Plant Journal, 108 (5), 1283-1294. doi: 10.1111/tpj.15509

Survase, Abhijeet, Furtado, Agnelo, Thengane, Ratnakar and Henry, Robert (2021). Identification of genes associated with chapatti quality using transcriptome analysis. Journal of Cereal Science, 101 103276, 1-11. doi: 10.1016/j.jcs.2021.103276

Harine, Israt Jahan, Islam, Mohammad Rafiqul, Hossain, Mahmud, Afroz, Hasina, Jahan, Rounok, Siddique, Abu Bakkar, Uddin, Shihab, Hossain, Mohammad Anwar, Alamri, Saud, Siddiqui, Manzer H. and Henry, Robert J. (2021). Arsenic cccumulation in rice grain as influenced by water management: human health risk assessment. Agronomy, 11 (9) 1741, 1741. doi: 10.3390/agronomy11091741

Ananda, Galaihalage, Norton, Sally, Blomstedt, Cecilia, Furtado, Agnelo, Møller, Birger, Gleadow, Roslyn and Henry, Robert (2021). Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genes. The Plant Genome, 14 (3) e20123, e20123. doi: 10.1002/tpg2.20123

Mai, Thuy T. P., Hardner, Craig M., Alam, Mobashwer M., Henry, Robert J. and Topp, Bruce L. (2021). Phenotypic characterisation for growth and nut characteristics revealed the extent of genetic diversity in wild macadamia germplasm. Agriculture, 11 (7) 680, 1-14. doi: 10.3390/agriculture11070680

Bhatt, Vacha, Barvkar, Vitthal T., Furtado, Agnelo, Henry, Robert J. and Nadaf, Altafhusain (2021). Fragrance in Pandanus amaryllifolius Roxb. Despite the presence of a betaine aldehyde dehydrogenase 2. International Journal of Molecular Sciences, 22 (13) 6968, 1-18. doi: 10.3390/ijms22136968

Sharma, Priyanka, Al-Dossary, Othman, Alsubaie, Bader, Al-Mssallem, Ibrahim, Nath, Onkar, Mitter, Neena, Rodrigues Alves Margarido, Gabriel, Topp, Bruce, Murigneux, Valentine, Kharabian Masouleh, Ardashir, Furtado, Agnelo and Henry, Robert J. (2021). Improvements in the sequencing and assembly of plant genomes. Gigabyte, 2021, 1-10. doi: 10.46471/gigabyte.24

Vanambathina, Prameela, Rachaputi, Rao C. N., Sultanbawa, Yasmina, Phan, Anh Dao Thi, Henry, Robert J. and Brier, Hugh (2021). Biochemical basis of resistance to pod borer (Helicoverpa armigera) in Australian wild relatives of pigeonpea. Legume Science, 3 (4) leg3.101. doi: 10.1002/leg3.101

O’Connor, Katie M., Hayes, Ben J., Hardner, Craig M., Alam, Mobashwer, Henry, Robert J. and Topp, Bruce L. (2021). Genomic selection and genetic gain for nut yield in an Australian macadamia breeding population. BMC Genomics, 22 (1) 370, 1-12. doi: 10.1186/s12864-021-07694-z

Healey, Adam L., Shepherd, Mervyn, King, Graham J., Butler, Jakob B., Freeman, Jules S., Lee, David J., Potts, Brad M., Silva-Junior, Orzenil B., Baten, Abdul, Jenkins, Jerry, Shu, Shengqiang, Lovell, John T., Sreedasyam, Avinash, Grimwood, Jane, Furtado, Agnelo, Grattapaglia, Dario, Barry, Kerrie W., Hundley, Hope, Simmons, Blake A., Schmutz, Jeremy, Vaillancourt, René E. and Henry, Robert J. (2021). Pests, diseases, and aridity have shaped the genome of Corymbia citriodora. Communications Biology, 4 (1) 537, 1-13. doi: 10.1038/s42003-021-02009-0

Henry, Robert J. (2021). Genomics of grain quality in cereals. Crop Breeding and Applied Biotechnology, 21 (spe) e379821S1. doi: 10.1590/1984-70332021v21sa14

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Wambugu, Peterson W., Ndjiondjop, Marie-Noelle and Henry, Robert (2021). Genetics and genomics of African rice (Oryza glaberrima Steud) domestication. Rice, 14 (1) 6, 6. doi: 10.1186/s12284-020-00449-6

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Feder, Daniel, McGeary, Ross P., Mitić, Natasa, Lonhienne, Thierry, Furtado, Agnelo, Schulz, Benjamin L., Henry, Robert J., Schmidt, Susanne, Guddat, Luke W. and Schenk, Gerhard (2020). Structural elements that modulate the substrate specificity of plant purple acid phosphatases: avenues for improved phosphorus acquisition in crops. Plant Science, 294 110445, 110445. doi: 10.1016/j.plantsci.2020.110445

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Toyomoto, Daiki, Uemura, Masato, Taura, Satoru, Sato, Tadashi, Henry, Robert, Ishikawa, Ryuji and Ichitani, Katsuyuki (2019). Segregation distortion observed in the progeny of crosses between Oryza sativa and O. meridionalis caused by abortion during seed development. Plants, 8 (10) 398, 398. doi: 10.3390/plants8100398

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Marquardt, Annelie, Henry, Robert J. and Botha, Frederik C. (2019). Midrib sucrose accumulation and sugar transporter gene expression in YCS-affected sugarcane leaves. Tropical Plant Biology, 12 (3), 186-205. doi: 10.1007/s12042-019-09221-7

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Henry, Robert (2017). Australia's role in feeding the world, the future of Australian agriculture. Australian Journal of Agricultural and Resource Economics, 61 (2), E10-E11. doi: 10.1111/1467-8489.12207

Powell, Jonathan J. , Fitzgerald, Timothy L. , Stiller, Jiri, Berkman, Paul J. , Gardiner, Donald M. , Manners, John M. , Henry, Robert J. and Kazan, Kemal (2017). The defence-associated transcriptome of hexaploid wheat displays homoeolog expression and induction bias. Plant Biotechnology Journal, 15 (4), 533-543. doi: 10.1111/pbi.12651

Powell, Jonathan J., Carere, Jason, Fitzgerald, Timothy L., Stiller, Jiri, Covarelli, Lorenzo, Xu, Qian, Gubler, Frank, Colgrave, Michelle L., Gardiner, Donald M., Manners, John M., Henry, Robert J. and Kazan, Kemal (2017). The Fusarium crown rot pathogen Fusarium pseudograminearum triggers a suite of transcriptional and metabolic changes in bread wheat (Triticum aestivum L.). Annals of Botany, 119 (5), 853-867. doi: 10.1093/aob/mcw207

Wakte, Kantilal, Zanan, Rahul, Hinge, Vidya, Khandagale, Kiran, Nadaf, Altafhusain and Henry, Robert (2017). Thirty-three years of 2-acetyl-1-pyrroline, a principal basmati aroma compound in scented rice (Oryza sativa L.): a status review. Journal of the Science of Food and Agriculture, 97 (2), 384-395. doi: 10.1002/jsfa.7875

Hoang, Nam V., Furtado, Agnelo, Donnan, Laura, Keeffe, Eloise C., Botha, Frederik C. and Henry, Robert J. (2016). High-throughput profiling of the fiber and sugar composition of sugarcane biomass. Bioenergy Research, 10 (2), 1-17. doi: 10.1007/s12155-016-9801-8

Cheng, Bing, Furtado, Agnelo, Smyth, Heather E. and Henry, Robert J. (2016). Influence of genotype and environment on coffee quality. Trends in Food Science and Technology, 57 (A), 20-30. doi: 10.1016/j.tifs.2016.09.003

Healey, Adam L., Lee, David J., Lupoi, Jason S., Papa, Gabriella, Guenther, Joel M., Corno, Luca, Adani, Fabrizio, Singh, Seema, Simmons, Blake A. and Henry, Robert J. (2016). Evaluation of relationships between growth rate, tree size, lignocellulose composition, and enzymatic saccharification in interspecific Corymbia hybrids and parental taxa. Frontiers in Plant Science, 7 (NOVEMBER2016) 1705, 1705. doi: 10.3389/fpls.2016.01705

Nock, Catherine J., Baten, Abdul, Barkla, Bronwyn J., Furtado, Agnelo, Henry, Robert J. and King, Graham J. (2016). Genome and transcriptome sequencing characterises the gene space of Macadamia integrifolia (Proteaceae). BMC Genomics, 17 (1) 937, 937. doi: 10.1186/s12864-016-3272-3

Zanan, Rahul, Khandagale, Kiran, Hinge, Vidya, Elangovan, M., Henry, Robert J. and Nadaf, Altafhusain (2016). Characterization of fragrance in sorghum (Sorghum bicolor (L.) Moench) grain and development of a gene-based marker for selection in breeding. Molecular Breeding, 36 (11) 146. doi: 10.1007/s11032-016-0582-8

Rangan, Parimalan, Furtado, Agnelo and Henry, Robert J. (2016). Commentary: new evidence for grain specific C4 photosynthesis in wheat. Frontiers in Plant Science, 7 (OCTOBER2016) 1537. doi: 10.3389/fpls.2016.01537

Nirmal, Ravi C., Furtado, Agnelo, Wrigley, Colin and Henry, Robert J. (2016). Influence of gene expression on hardness in wheat. PLoS ONE, 11 (10) 164746, e0164746. doi: 10.1371/journal.pone.0164746

Healey, Adam L., Lupoi, Jason S., Lee, David J., Sykes, Robert W., Guenther, Joel M., Tran, Kim, Decker, Stephen R., Singh, Seema, Simmons, Blake A. and Henry, Robert J. (2016). Effect of aging on lignin content, composition and enzymatic saccharification in Corymbia hybrids and parental taxa between years 9 and 12. Biomass and Bioenergy, 93, 50-59. doi: 10.1016/j.biombioe.2016.06.016

Rangan, Parimalan, Furtado, Agnelo and Henry, Robert J. (2016). New evidence for grain specific C4 photosynthesis in wheat. Scientific Reports, 6 (1) 31721, 31721. doi: 10.1038/srep31721

Tran, Hue T. M., Lee, L. Slade, Furtado, Agnelo, Smyth, Heather and Henry, Robert J. (2016). Advances in genomics for the improvement of quality in coffee. Journal of the Science of Food and Agriculture, 96 (10), 3300-3312. doi: 10.1002/jsfa.7692

Khemmuk, Wanporn, Shivas, Roger G., Henry, Robert and Geering, Andrew D. W. (2016). Fungi associated with foliar diseases of wild and cultivated rice (Oryza spp.) in northern Queensland. Australasian Plant Pathology, 45 (3), 297-308. doi: 10.1007/s13313-016-0418-3

Henry, Robert J., Rangan, Parimalan and Furtado, Agnelo (2016). Functional cereals for production in new and variable climates. Current Opinion in Plant Biology, 30, 11-18. doi: 10.1016/j.pbi.2015.12.008

Bunyatang, Orawan, Chirapongsatonkul, Nion, Bangrak, Phuwadol, Henry, Robert and Churngchow, Nunta (2016). Molecular cloning and characterization of a novel bi-functional α-amylase/subtilisin inhibitor from Hevea brasiliensis. Plant Physiology and Biochemistry, 101, 76-87. doi: 10.1016/j.plaphy.2016.01.014

Lupoi, Jason, Simmons, Blake and Henry, Robert (2016). Biomass modification, characterization and process monitoring analytics to support biofuel and biomaterial production. Frontiers in Bioengineering and Biotechnology, 4 (MAR) 25, 25.1-25.2. doi: 10.3389/fbioe.2016.00025

Tikapunya, Tiparat, Fox, Glen, Furtado, Agnelo and Henry, Robert (2016). Grain physical characteristics of the Australian wild rices. Plant Genetic Resources, 15 (5), 1-12. doi: 10.1017/S1479262116000083

Healey, Adam L., Lee, David J., Furtado, Agnelo, Simmons, Blake A. and Henry, Robert J. (2015). Efficient eucalypt cell wall deconstruction and conversion for sustainable lignocellulosic biofuels. Frontiers in Bioengineering and Biotechnology, 3 (NOV) 190, 190.1-190.14. doi: 10.3389/fbioe.2015.00190

Hoang, Nam V., Furtado, Agnelo, Botha, Frederik C., Simmons, Blake A. and Henry, Robert J. (2015). Potential for genetic improvement of sugarcane as a source of biomass for biofuels. Frontiers in Bioengineering and Biotechnology, 3 (NOV) 182, 1-15. doi: 10.3389/fbioe.2015.00182

Waters, Daniel L. E., Subbaiyan, Gopala Krishnan, Mani, Elangovan, Singh, Sukhpa, Vaddadi, Satyadev, Baten, Abdul and Henry, Robert J. (2015). Genome wide polymorphisms and yield heterosis in rice (Oryza sativa subsp. indica). Tropical Plant Biology, 8 (3-4), 117-125. doi: 10.1007/s12042-015-9156-x

Lupoi, Jason S., Singh, Seema, Parthasarathi, Ramakrishnan, Simmons, Blake A. and Henry, Robert J. (2015). Recent innovations in analytical methods for the qualitative and quantitative assessment of lignin. Renewable and Sustainable Energy Reviews, 49 4346, 871-906. doi: 10.1016/j.rser.2015.04.091

Schiffman, Richard and Henry, Robert (2015). Australian rice to the rescue. New Scientist, 228 (3044), 27-27. doi: 10.1016/S0262-4079(15)31464-0

Wang, Kai, Wambugu, Peterson W., Zhang, Bin, Wu, Alex Chi, Henry, Robert J. and Gilbert, Robert G. (2015). The biosynthesis, structure and gelatinization properties of starches from wild and cultivated African rice species (Oryza barthii and Oryza glaberrima). Carbohydrate Polymers, 129, 92-100. doi: 10.1016/j.carbpol.2015.04.035

Wambugu, Peterson W., Brozynska, Marta, Furtado, Agnelo, Waters, Daniel L. and Henry, Robert J. (2015). Relationships of wild and domesticated rices (Oryza AA genome species) based upon whole chloroplast genome sequences. Scientific Reports, 5 (Art No.: 13957) 13957, 13957. doi: 10.1038/srep13957

Abberton, Michael, Batley, Jacqueline, Bentley, Alison, Bryant, John, Cai, Hongwei, Cockram, James, Costa de Oliveira, Antonio, Cseke, Leland J., Dempewolf, Hannes, De Pace, Ciro, Edwards, David, Gepts, Paul, Greenland, Andy, Hall, Anthony E., Henry, Robert, Hori, Kiyosumi, Howe, Glenn Thomas, Hughes, Stephen, Humphreys, Mike, Lightfoot, David, Marshall, Athole, Mayes, Sean, Nguyen, Henry T., Ogbonnaya, Francis C., Ortiz, Rodomiro, Paterson, Andrew H., Tuberosa, Roberto, Valliyodan, Babu, Varshney, Rajeev K. and Yano, Masahiro (2015). Global agricultural intensification during climate change: a role for genomics. Plant Biotechnology Journal, 14 (4), 1095-1098. doi: 10.1111/pbi.12467

Brozynska, Marta., Furtado, Agnelo. and Henry, Robert J. (2015). Genomics of crop wild relatives: Expanding the gene pool for crop improvement. Plant Biotechnology Journal, 14 (4), 1070-1085. doi: 10.1111/pbi.12454

Wang, Kai, Hasjim, Jovin, Wu, Alex Chi, Li, Enpeng, Henry, Robert J. and Gilbert, Robert G. (2015). Roles of GBSSI and SSIIa in determining amylose fine structure. Carbohydrate Polymers, 127, 264-274. doi: 10.1016/j.carbpol.2015.03.081

Kole, Chittaranjan, Muthamilarasan, Mehanathan, Henry, Robert, Edwards, David, Sharma, Rishu, Abberton, Michael, Batley, Jacqueline, Bentley, Alison, Blakeney, Michael, Bryant, John, Cai, Hongwei, Cakir, Mehmet, Cseke, Leland J., Cockram, James, de Oliveira, Antonio Costa, De Pace, Ciro, Dempewolf, Hannes, Ellison, Shelby, Gepts, Paul, Greenland, Andy, Hall, Anthony, Hori, Kiyosumi, Hughes, Stephen, Humphreys, Mike W., Iorizzo, Massimo, Ismail, Abdelbagi M., Marshall, Athole, Mayes, Sean, Nguyen, Henry T. ... Prasad, Manoj (2015). Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects. Frontiers in Plant Science, 6 (AUG) 563, 1-16. doi: 10.3389/fpls.2015.00563

Hoang, Nam V., Furtado, Agnelo, McQualter, Richard B. and Henry, Robert J. (2015). Next Generation Sequencing of total DNA from sugarcane provides no evidence for chloroplast heteroplasmy. New Negatives in Plant Science, 1-2, 33-45. doi: 10.1016/j.neps.2015.10.001

Copetti, Dario, Zhang, Jianwei, El Baidouri, Moaine, Gao, Dongying, Wang, Jun, Barghini, Elena, Cossu, Rosa M., Angelova, Angelina, Maldonado L., Carlos E., Roffler, Stefan, Ohyanagi, Hajime, Wicker, Thomas, Fan, Chuanzhu, Zuccolo, Andrea, Chen, Mingsheng, Costa de Oliveira, Antonio, Han, Bin, Henry, Robert, Hsing, Yue-ie, Kurata, Nor, Wang, Wen, Jackson, Scott A., Panaud, Olivier and Wing, Rod A. (2015). RiTE database: A resource database for genus-wide rice genomics and evolutionary biology. BMC Genomics, 16 (1) 538, 538-538. doi: 10.1186/s12864-015-1762-3

Lupoi, Jason S, Smith-Moritz, Andreia, Singh, Seema, McQualter, Richard, Scheller, Henrik V, Simmons, Blake A and Henry, Robert J (2015). Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging. Biotechnology for Biofuels, 8 (98) 98, 98. doi: 10.1186/s13068-015-0279-y

Furtado, A., Bundock, P. C., Banks, P. M., Fox, G., Yin, X. and Henry, R. J. (2015). A novel highly differentially expressed gene in wheat endosperm associated with bread quality. Scientific Reports, 5 (10446) 10446, 1-14. doi: 10.1038/srep10446

Anacleto, Roslen, Cuevas, Rosa Paula, Jimenez, Rosario, Llorente, Cindy, Nissila, Eero, Henry, Robert and Sreenivasulu, Nese (2015). Prospects of breeding high-quality rice using post-genomic tools. Theoretical and Applied Genetics, 128 (8), 1449-1466. doi: 10.1007/s00122-015-2537-6

Fitzgerald, Timothy L., Powell, Jonathan J., Schneebeli, Katharina, Hsia, M. Mandy, Gardiner, Donald M., Bragg, Jennifer N., McIntyre, C. Lynne, Manners, John M., Ayliffe, Mick, Watt, Michelle, Vogel, John P., Henry, Robert J. and Kazan, Kemal (2015). Brachypodium as an emerging model for cereal-pathogen interactions. Annals of Botany, 115 (5), 717-731. doi: 10.1093/aob/mcv010

McIntyre, C.L, Goode, M.L, Cordeiro, G, Bundock, P, Eliott, F, Henry, R.J, Casu, R.E, Bonnett, G.D and Aitken, K.S (2015). Characterisation of alleles of the sucrose phosphate synthase gene family in sugarcane and their association with sugar-related traits. Molecular Breeding, 35 (3) 98. doi: 10.1007/s11032-015-0286-5

Lupoi, Jason S., Healey, Adam, Singh, Seema, Sykes, Robert, Davis, Mark, Lee, David J., Shepherd, Merv, Simmons, Blake A. and Henry, Robert J. (2015). High-throughput prediction of Acacia and eucalypt lignin syringyl/guaiacyl content using FT-Raman spectroscopy and partial least squares modelling. Bioenergy Research, 8 (3), 953-963. doi: 10.1007/s12155-015-9578-1

Chen, Shilin, Wang, Yitao, Zhao, Zhongzhen, Leon, Christine J. and Henry, Robert J. (2015). Sustainable utilization of TCM resources. Evidence-Based Complementary and Alternative Medicine, 2015 613836, 613836.1-613836.2. doi: 10.1155/2015/613836

Wang, Kai, Henry, Robert J. and Gilbert, Robert G. (2014). Causal relations among starch biosynthesis, structure, and properties. Springer Science Reviews, 2 (1-2), 15-33. doi: 10.1007/s40362-014-0016-0

Eliott, F. G., Shepherd, M., Rossetto, M., Bundock, P., Rice, N. and Henry, R. J. (2014). Contrasting breeding systems revealed in the rainforest genus Davidsonia (Cunoniaceae): Can polyembryony turn the tables on rarity?. Australian Journal of Botany, 62 (6), 451-464. doi: 10.1071/BT14063

Furtado, Agnelo, Lupoi, Jason S., Hoang, Nam V., Healey, Adam, Singh, Seema, Simmons, Blake A. and Henry, Robert J. (2014). Modifying plants for biofuel and biomaterial production. Plant Biotechnology Journal, 12 (9), 1246-1258. doi: 10.1111/pbi.12300

Brozynska, Marta, Omar, Ernnie Syafika, Furtado, Agnelo, Crayn, Darren, Simon, Bryan, Ishikawa, Ryuji and Henry, Robert James (2014). Chloroplast genome of novel rice germplasm identified in Northern Australia. Tropical Plant Biology, 7 (3-4), 111-120. doi: 10.1007/s12042-014-9142-8

Liu, Ya-Xi, Wang, Ji-Rui, Liu, Ze-Hou, Wang, Yan, Chen, Xing, Henry, Robert J., Wei, Yu-Ming, Nevo, Eviatar and Zheng, You-Liang (2014). Adaptive evolution of alpha-amylase genes in wild barley (Hordeum spontaneum) on micro and macro scales. Journal of Systematics and Evolution, 52 (6), 765-778. doi: 10.1111/jse.12108

Brozynska, Marta, Furtado, Agnelo and Henry, Robert James (2014). Direct Chloroplast sequencing: Comparison of sequencing platforms and analysis tools for whole chloroplast barcoding. PLoS One, 9 (10) e110387, e110387.1-e110387.10. doi: 10.1371/journal.pone.0110387

Rossetto, Maurizio and Henry, Robert J. (2014). Escape from the laboratory: new horizons for plant genetics. Trends in Plant Science, 19 (9), 554-555. doi: 10.1016/j.tplants.2014.06.011

Henry, Robert James and Nevo, Eviatar (2014). Exploring natural selection to guide breeding for agriculture. Plant Biotechnology Journal, 12 (6), 655-662. doi: 10.1111/pbi.12215

Healey, Adam, Furtado, Agnelo, Cooper, Tal and Henry, Robert J. (2014). Protocol: a simple method for extracting next-generation sequencing quality genomic DNA from recalcitrant plant species. Plant Methods, 10 (1) 21, 1-8. doi: 10.1186/1746-4811-10-21

Lupoi, Jason S., Singh, Seema, Davis, Mark, Lee, David J., Shepherd, Merv, Simmons, Blake A. and Henry, Robert J. (2014). High-throughput prediction of eucalypt lignin syringyl/guaiacyl content using multivariate analysis: a comparison between mid-infrared, near-infrared, and Raman spectroscopies for model development. Biotechnology for Biofuels, 7 (1) 93, 93. doi: 10.1186/1754-6834-7-93

Krishna S., Gopala, Waters, Daniel L. E. and Henry, Robert J. (2014). Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome. PLoS One, 9 (6) e98843, e98843.1-e98843.6. doi: 10.1371/journal.pone.0098843

Wang, Kai, Hasjim, Jovin, Chi Wu, Alex, Henry, Robert J. and Gilbert, Robert G. (2014). Variation in amylose fine structure of starches from different botanical sources. Journal of Agricultural and Food Chemistry, 62 (19), 4443-4453. doi: 10.1021/jf5011676

Li, Xiwen, Yang, Yang, Henry, Robert J., Rossetto, Maurizio, Wang, Yitao and Chen, Shilin (2014). Plant DNA barcoding: from gene to genome. Biological Reviews, Early View (1), 1-10. doi: 10.1111/brv.12104

Aitken, Karen S., McNeil, Meredith D., Hermann, Scott, Bundock, Peter C., Kilian, Andrzej, Heller-Uszynska, Katarzyna, Henry, Robert J. and Li, Jingchuan (2014). A comprehensive genetic map of sugarcane that provides enhanced map coverage and integrates high-throughput Diversity Array Technology (DArT) markers. BMC Genomics, 15 (152) 152, 1-12. doi: 10.1186/1471-2164-15-152

Henry, Robert J. (2014). Genomics strategies for germplasm characterization and the development of climate resilient crops. Frontiers in Plant Science, 5 (FEB) 68, 68.1-68.4. doi: 10.3389/fpls.2014.00068

Lupoi, Jason S., Singh, Seema, Simmons, Blake A. and Henry, Robert J. (2014). Assessment of lignocellulosic biomass using analytical spectroscopy: an evolution to high-throughput techniques. Bioenergy Research, 7 (1), 1-23. doi: 10.1007/s12155-013-9352-1

Kasem, S., Waters, D. L. E., Ward, R. M., Rice, N. and Henry, R. J. (2014). Wild Oryza grain physico-chemical properties. Tropical Plant Biology, 7 (1), 13-18. doi: 10.1007/s12042-013-9133-1

Henry, R. J. (2014). Wheat genomics for grain quality improvement. Cereal Foods World, 59 (1), 22-24. doi: 10.1094/CFW-59-1-0022

Berkman, Paul J., Bundock, Peter C., Casu, Rosanne E., Henry, Robert J., Rae, Anne L. and Aitken, Karen S. (2014). A Survey Sequence Comparison of Saccharum Genotypes Reveals Allelic Diversity Differences. Tropical Plant Biology, 7 (2), 71-83. doi: 10.1007/s12042-014-9139-3

Garcia A.A.F., Mollinari M., Marconi T.G., Serang O.R., Silva R.R., Vieira M.L.C., Vicentini R., Costa E.A., Mancini M.C., Garcia M.O.S., Pastina M.M., Gazaffi R., Martins E.R.F., Dahmer N., Sforca D.A., Silva C.B.C., Bundock P., Henry R.J., Souza G.M., Van Sluys M.-A., Landell M.G.A., Carneiro M.S., Vincentz M.A.G., Pinto L.R., Vencovsky R. and Souza A.P. (2013). SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids. Scientific Reports, 3 (1) 3399, 03399.1-03399.10. doi: 10.1038/srep03399

Shapter, Frances M., Cross, Michael, Ablett, Gary, Malory, Sylvia, Chivers, Ian H., King, Graham J. and Henry, Robert J. (2013). High-throughput sequencing and mutagenesis to accelerate the domestication of Microlaena stipoides as a new food crop. PLoS One, 8 (12) e82641, e82641.1-e82641.9. doi: 10.1371/journal.pone.0082641

Sotowa, Masahiro, Ootsuka, Kenta, Kobayashi, Yuu, Hao, Yin, Tanaka, Katsunori, Ichitani, Katsuyuki, Flowers, Jonathan M., Purugganan, Michael D., Nakamura, Ikuo, Sato, Yo-Ichiro, Sato, Tadashi, Crayn, Darren, Simon, Bryan, Waters, Daniel L. E., Henry, Robert J. and Ishikawa, Ryuji (2013). Molecular relationships between Australian annual wild rice, Oryza meridionalis, and two related perennial forms. Rice, 6 (26) 26. doi: 10.1186/1939-8433-6-26

Henry, Robert J. (2013). Sequencing of wild crop relatives to support the conservation and utilization of plant genetic resources. Plant Genetic Resources, FirstView (S1), 1-3. doi: 10.1017/S1479262113000439

Koepke, Tyson, Schaeffer, Scott, Harper, Artemus, Dicenta, Federico, Edwards, Mark, Henry, Robert J., Moller, Birger L., Meisel, Lee, Oraguzie, Nnadozie, Silva, Herman, Sanchez-Perez, Raquel and Dhingra, Amit (2013). Comparative genomics analysis in Prunoideae to identify biologically relevant polymorphisms. Plant Biotechnology Journal, 11 (7), 883-893. doi: 10.1111/pbi.12081

Lakew, B., Henry, R. J., Eglinton, J., Baum, M., Ceccarelli, S. and Grando, S. (2013). SSR analysis of introgression of drought tolerance from the genome of Hordeum spontaneum into cultivated barley (Hordeum vulgare ssp vulgare). Euphytica, 191 (2), 231-243. doi: 10.1007/s10681-012-0795-9

McPherson, Hannah, van der Merwe, Marlien, Delaney, Sven K., Edwards, Mark A., Henry, Robert J., McIntosh, Emma, Rymer, Paul D., Milner, Melita L., Siow, Juelian and Rossetto, Maurizio (2013). Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree. BMC Ecology, 13 (1) 8, 8.1-8.11. doi: 10.1186/1472-6785-13-8

Eliott, F. G., Connelly, C., Rossetto, M., Shepherd, M., Rice, N. and Henry, R. J. (2013). Novel microsatellite markers for the endangered Australian rainforest tree Davidsonia jerseyana (Cunoniaceae) and cross-species amplification in the Davidsonia genus. Conservation Genetics Resources, 5 (1), 161-164. doi: 10.1007/s12686-012-9758-7

Li, XiWen, Gao, HuanHuan, Wang, YiTao, Song, JingYuan, Henry, Robert, Wu, HeZhen, Hu, ZhiGang, Yao, Hui, Luo, HongMei, Luo, Kun, Pan, HongLin and Chen, ShiLin (2013). Complete chloroplast genome sequence of Magnolia grandiflora and comparative analysis with related species. Science China Life Sciences, 56 (2), 189-198. doi: 10.1007/s11427-012-4430-8

Wambugu, Peterson W., Furtado, Agnelo, Le Waters, Daniel, Nyamongo, Desterio O. and Henry, Robert J. (2013). Conservation and utilization of African Oryza genetic resources. Rice, 6 (1) 29, 29.1-29.13. doi: 10.1186/1939-8433-6-29

Shepherd, M., Bihua, C. and Henry, R. (2013). Microsatellite markers for Eucalyptus pilularis (Subgenus Eucalyptus); sourcing genetic markers outside the subgenus. Silvae Genetica, 62 (4-5), 246-255. doi: 10.1515/sg-2013-0030

Devarumath, Rachayya M., Kalwade, Sachin B., Bundock, Peter, Eliott, Frances G. and Henry, Robert (2013). Independent target region amplification polymorphism and single-nucleotide polymorphism marker utility in genetic evaluation of sugarcane genotypes. Plant Breeding, 132 (6), 736-747. doi: 10.1111/pbr.12092

Lakew, Berhane, Henry, Robert J., Ceccarelli, Salvatore, Grando, Stefania, Eglinton, Jason and Baum, Michael (2013). Genetic analysis and phenotypic associations for drought tolerance in Hordeum spontaneum introgression lines using SSR and SNP markers. Euphytica, 189 (1), 9-29. doi: 10.1007/s10681-012-0674-4

Cetinkol, Oezguel Persil, Smith-Moritz, Andreia M., Cheng, Gang, Lao, Jeemeng, George, Anthe, Hong, Kunlun, Henry, Robert, Simmons, Blake A., Heazlewood, Joshua L. and Holmes, Bradley M. (2012). Structural and chemical characterization of hardwood from tree species with applications as Bioenergy Feedstocks. PLoS One, 7 (12) e52820, e52820.1-e52820.11. doi: 10.1371/journal.pone.0052820

Henry, Robert J. (2012). Preface. Molecular Markers in Plants. doi: 10.1002/9781118473023

Henry, Robert J. (2012). Advances in DNA sequencing enabling more rapid development of improved biomass and biofuel conversion technologies. Biofuels, 3 (5), 507-509. doi: 10.4155/BFS.12.48

Gillies, Susan A., Futardo, Agnelo and Henry, Robert J. (2012). Gene expression in the developing aleurone and starchy endosperm of wheat. Plant Biotechnology Journal, 10 (6), 668-679. doi: 10.1111/j.1467-7652.2012.00705.x

Subbaiyan, Gopala K., Waters, Daniel L. E., Katiyar, Sanjay K., Sadananda, Ajanahalli R., Vaddadi, Satyadev and Henry, Robert J. (2012). Genome-wide DNA polymorphisms in elite indica rice inbreds discovered by whole-genome sequencing. Plant Biotechnology Journal, 10 (6), 623-634. doi: 10.1111/j.1467-7652.2011.00676.x

Edwards, David, Henry, Robert J. and Edwards, Keith J. (2012). Preface: advances in DNA sequencing accelerating plant biotechnology. Plant Biotechnology Journal, 10 (6), 621-622. doi: 10.1111/j.1467-7652.2012.00724.x

Bundock, Peter C., Casu, Rosanne E. and Henry, Robert J. (2012). Enrichment of genomic DNA for polymorphism detection in a non-model highly polyploid crop plant. Plant Biotechnology Journal, 10 (6), 657-667. doi: 10.1111/j.1467-7652.2012.00707.x

Shapter, Frances M., Fitzgerald, Timothy L., Waters, Daniel L.E., McDonald, Stuart, Chivers, Ian H., Nevo, Eviatar and Henry, Robert (2012). Analysis of adaptive ribosomal gene diversity in wild plant populations from contrasting climatic environments. Plant Signaling and Behavior, 7 (6), 602-604. doi: 10.4161/psb.19938

Hill, Helen, Lee, L. Slade and Henry, Robert J. (2012). Variation in sorghum starch synthesis genes associated with differences in starch phenotype. Food Chemistry, 131 (1), 175-183. doi: 10.1016/j.foodchem.2011.08.057

Henry, Robert J., Edwards, Mark, Waters, Daniel L. E., Krishnan, S. Gopala, Bundock, Peter, Sexton, Timothy R., Masouleh, Ardashir K., Nock, Catherine J. and Pattemore, Julie (2012). Application of large-scale sequencing to marker discovery in plants. Journal of Biosciences, 37 (5), 829-841. doi: 10.1007/s12038-012-9253-z

Kharabian-Masouleh, Ardashir, Waters, Daniel L. E., Reinke, Russell F., Ward, Rachelle and Henry, Robert J. (2012). SNP in starch biosynthesis genes associated with nutritional and functional properties of rice. Scientific Reports, 2 (1) 557, 557.1-557.9. doi: 10.1038/srep00557

Waters, Daniel L. E., Nock, Catherine J., Ishikawa, Ryuji, Rice, Nicole and Henry, Robert J. (2012). Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice. Ecology and Evolution, 2 (1), 211-217. doi: 10.1002/ece3.66

Henry, Robert J. (2012). Next generation sequencing for understanding and accelerating crop domestication. Briefings in Functional Genomics, 11 (1) elr032, 51-56. doi: 10.1093/bfgp/elr032

Kasem, Shabana, Waters, Daniel L. E. and Henry, Robert J. (2012). Analysis of Starch Gene Diversity in the Wild Relatives of Oryza sativa. Tropical Plant Biology, 5 (4), 286-308. doi: 10.1007/s12042-012-9111-z

Sexton, Timothy R., Henry, Robert J., Harwood, Chris E., Thomas, Dane S., McManus, Luke J., Raymond, Carolyn, Henson, Michael and Shepherd, Mervyn (2012). Pectin Methylesterase genes influence solid wood properties of Eucalyptus pilularis. Plant Physiology, 158 (1), 531-541. doi: 10.1104/pp.111.181602

Fitzgerald, Timothy L., Shapter, Frances M., McDonald, Stuart, Waters, Daniel L. E., Chivers, Ian H., Drenth, Andre, Nevo, Eviatar and Henry, Robert J. (2011). Genome diversity in wild grasses under environmental stress. Proceedings of the National Academy of Sciences of the United States of America, 108 (52), 21140-21145. doi: 10.1073/pnas.1115203108

Souza, Glaucia Mendes, Berges, Helene, Bocs, Stephanie, Casu, Rosanne, D’Hont, Angelique, Ferreira, Joao Eduardo, Henry, Robert, Ming, Ray, Potier, Bernard, Van Sluys, Marie-Anne, Vincentz, Michel and Paterson, Andrew H. (2011). The sugarcane genome challenges: Strategies for sequencing a highly complex genome. Tropical Plant Biology, 4 (3-4), 145-156. doi: 10.1007/s12042-011-9079-0

Kharabian-Masouleh, Ardashir, Waters, Daniel L. E., Reinke, Russell F. and Henry, Robert J. (2011). Discovery of polymorphisms in starch-related genes in rice germplasm by amplification of pooled DNA and deeply parallel sequencing. Plant Biotechnology Journal, 9 (9), 1074-1085. doi: 10.1111/j.1467-7652.2011.00629.x

Malory, Sylvia, Shapter, Frances M., Elphinstone, Martin S., Chivers, Ian H. and Henry, Robert J. (2011). Characterizing homologues of crop domestication genes in poorly described wild relatives by high-throughput sequencing of whole genomes. Plant Biotechnology Journal, 9 (9), 1131-1140. doi: 10.1111/j.1467-7652.2011.00640.x

Shepherd, Mervyn, Bartle, John, Lee, David J., Brawner, Jeremy, Bush, David, Turnbull, Paul, Macdonell, Paul, Brown, Troy R., Simmons, Blake and Henry, Robert (2011). Eucalypts as a biofuel feedstock. Biofuels, 2 (6), 639-657. doi: 10.4155/bfs.11.136

Edwards, M. A. and Henry, R. J. (2011). DNA sequencing methods contributing to new directions in cereal research. Journal of Cereal Science, 54 (3), 395-400. doi: 10.1016/j.jcs.2011.07.006

Nock, Catherine J., Waters, Daniel L. E., Edwards, Mark A., Bowen, Stirling G., Rice, Nicole, Cordeiro, Giovanni M. and Henry, Robert J. (2011). Chloroplast genome sequences from total DNA for plant identification. Plant Biotechnology Journal, 9 (3), 328-333. doi: 10.1111/j.1467-7652.2010.00558.x

Kasem, S., Waters, D. L. E., Rice, N. F., Shapter, F. M. and Henry, R. J. (2011). The endosperm morphology of rice and its wild Rrelatives as observed by scanning electron microscopy. Rice, 4 (1), 12-20. doi: 10.1007/s12284-011-9060-4

Lakew, B., Eglinton, J., Henry, R. J., Baum, M., Grando, S. and Ceccarelli, S. (2011). The potential contribution of wild barley (Hordeum vulgare ssp spontaneum) germplasm to drought tolerance of cultivated barley (H. vulgare ssp vulgare). Field Crops Research, 120 (1), 161-168. doi: 10.1016/j.fcr.2010.09.011

Henry, Robert J., Rice, Nicole, Waters, Daniel L. E., Kasem, Shabana, Ishikawa, Ryuji, Hao, Yin, Dillon, Sally, Crayn, Darren, Wing, Rod and Vaughan, Duncan (2010). Australian Oryza: utility and conservation. Rice, 3 (4), 235-241. doi: 10.1007/s12284-009-9034-y

Sexton, Timothy R., Henry, Robert J., McManus, Luke J., Henson, Michael, Thomas, Dane S. and Shepherd, Mervyn (2010). Genetic association studies in Eucalyptus pilularis Smith (blackbutt). Australian Forestry, 73 (4), 254-258. doi: 10.1080/00049158.2010.10676336

Fitzgerald, Timothy Liam, Waters, Daniel Lex Ean, Brooks, Lyndon Owen and Henry, Robert James (2010). Erratum to Fragrance in rice (Oryza sativa) is associated with reduced yield under salt treatment. Environmental and Experimental Botany, 69 (2), 223-223. doi: 10.1016/j.envexpbot.2010.03.011

Pattemore, J. A., Rice, N., Marshall, D. F., Waugh, R. and Henry, R. J. (2010). Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science, 52 (3), 356-361. doi: 10.1016/j.jcs.2010.06.004

Edwards, M.A., Osborne, B.G. and Henry, R.J. (2010). Puroindoline genotype, starch granule size distribution and milling quality of wheat. Journal of Cereal Science, 52 (2), 314-320. doi: 10.1016/j.jcs.2010.05.015

Shepherd, Mervyn, Sexton, Timothy R., Thomas, Dane, Henson, Michael and Henry, Robert J. (2010). Geographical and historical determinants of microsatellite variation in Eucalyptus pilularis. Canadian Journal of Forest Research, 40 (6), 1051-1063. doi: 10.1139/X10-049

Fitzgerald, Timothy Liam, Waters, Daniel Lex Ean, Brooks, Lyndon Owen and Henry, Robert James (2010). Fragrance in rice (Oryza sativa) is associated with reduced yield under salt treatment. Environmental and Experimental Botany, 68 (3), 292-300. doi: 10.1016/j.envexpbot.2010.01.001

Kasem, S., Waters, D. L. E., Rice, N., Shapter, F. M. and Henry, R. J. (2010). Whole grain morphology of Australian rice species. Plant Genetic Resources: Characterisation and Utilisation, 8 (1), 74-81. doi: 10.1017/S1479262109990189

Davies, Maelor, Campbell, Malcolm and Henry, Robert (2010). The role of plant biotechnology in bio-energy production. Plant Biotechnology Journal, 8 (3), 243-243. doi: 10.1111/j.1467-7652.2009.00493.x

Henry, Robert J. (2010). Evaluation of plant biomass resources available for replacement of fossil oil. Plant Biotechnology Journal, 8 (3), 288-293. doi: 10.1111/j.1467-7652.2009.00482.x

Sexton, Timothy R., Henry, Robert J., McManus, Luke J., Bowen, Stirling and Shepherd, Mervyn (2010). Capture of assay template by multiplex PCR of long amplicons for genotyping SNPs and InDels with MALDI-TOF mass spectrometry. Molecular Breeding, 25 (3), 471-480. doi: 10.1007/s11032-009-9345-0

Ochieng, Joel W., Shepherd, Mervyn, Baverstock, Peter R., Nikles, Garth, Lee, David J. and Henry, Robert J. (2010). Two sympatric spotted gum species are molecularly homogeneous. Conservation Genetics, 11 (1), 45-56. doi: 10.1007/s10592-009-0001-3

Henry, Robert J. and Kole, Chittaranjan (2010). Preface to the volume. Genetics, Genomics and Breeding of Sugarcane. doi: 10.1201/EBK1578086849

Professor Robert Henry

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