| Featured projects | Duration |
|---|---|
|
Automated single cell quantitative in situ gene expression in cells and tissues (AutoMerFISH) Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2019 |
Publications
Journal Articles
Atterton, Cooper, Pelenyi, Alexandra, Jones, Justin, Currey, Laura, Al-Khalily, Majd, Wright, Lucinda, Doonan, Mikki, Knight, David, Kurniawan, Nyoman D., Walters, Shaun, Thor, Stefan and Piper, Michael (2025). The Hippo effector TEAD1 regulates postnatal murine cerebellar development. Brain Structure and Function, 230 (3) 42, 42-3. doi: 10.1007/s00429-025-02903-x
Vo, Tuan, Prakrithi, P., Jones, Kahli, Yoon, Sohye, Lam, Pui Yeng, Kao, Yung-Ching, Ma, Ning, Tan, Samuel X., Jin, Xinnan, Zhou, Chenhao, Crawford, Joanna, Walters, Shaun, Gupta, Ishaan, Soyer, Peter H., Khosrotehrani, Kiarash, Stark, Mitchell S. and Nguyen, Quan (2025). Assessing spatial sequencing and imaging approaches to capture the molecular and pathological heterogeneity of archived cancer tissues. Journal of Pathology, 265 (3), 274-288. doi: 10.1002/path.6383
Mitchell, Benjamin, Mu, Erica, Currey, Laura, Whitehead, Darryl, Walters, Shaun, Thor, Stefan, Kasherman, Maria and Piper, Michael (2024). A protocol for high-resolution episcopic microscopy and 3D volumetric analyses of the adult mouse brain. Neuroscience Letters, 824 137675, 1-6. doi: 10.1016/j.neulet.2024.137675
Vo, Tuan, Balderson, Brad, Jones, Kahli, Ni, Guiyan, Crawford, Joanna, Millar, Amanda, Tolson, Elissa, Singleton, Matthew, Kojic, Marija, Robertson, Thomas, Walters, Shaun, Mulay, Onkar, Bhuva, Dharmesh D., Davis, Melissa J., Wainwright, Brandon J., Nguyen, Quan and Genovesi, Laura A. (2023). Spatial transcriptomic analysis of Sonic hedgehog medulloblastoma identifies that the loss of heterogeneity and promotion of differentiation underlies the response to CDK4/6 inhibition. Genome Medicine, 15 (1) 29, 29. doi: 10.1186/s13073-023-01185-4
Tran, M., Yoon, S., Teoh, M., Andersen, S., Lam, PY., Purdue, B. W., Raghubar, A., Hanson, S.J., Devitt, K., Jones, K., Walters, S., Monkman, J., Kulasinghe, A., Tuong, Z.K., Soyer, H.P., Frazer, I. H. and Nguyen, Q. (2022). A robust experimental and computational analysis framework at multiple resolutions, modalities and coverages. Frontiers in Immunology, 13 911873, 911873. doi: 10.3389/fimmu.2022.911873
Beecher, Kate, Alvarez Cooper, Ignatius, Wang, Joshua, Walters, Shaun B., Chehrehasa, Fatemeh, Bartlett, Selena E. and Belmer, Arnauld (2021). Long-term overconsumption of sugar starting at adolescence produces persistent hyperactivity and neurocognitive deficits in adulthood. Frontiers in Neuroscience, 15 670430, 1-15. doi: 10.3389/fnins.2021.670430
Aoude, Lauren G., Wong, Bernadette, Bonazzi, Vanessa F, Brosda, Sandra, Walters, Shaun B., Koufariotis, Lambros T., Naeini, Marjan M., Pearson, John V, Oey, Harald, Patel, Kalpana, Bradford, Julia J., Bloxham, Conor J, Atkinson, Victoria, Law, Phillip, Strutton, Geoffrey, Bayley, Gerard, Yang, Samuel, Smithers, B. Mark, Waddell, Nicola, Miles, Kenneth and Barbour, Andrew P. (2021). Radiomics biomarkers correlate with CD8 expression and predict immune signatures in melanoma patients. Molecular Cancer Research, 19 (6) molcanres.1038.2020, 950-956. doi: 10.1158/1541-7786.mcr-20-1038
Beites, Tiago, O’Brien, Kathryn, Tiwari, Divya, Engelhart, Curtis A., Walters, Shaun, Andrews, Jenna, Yang, Hee-Jeong, Sutphen, Michelle L., Weiner, Danielle M., Dayao, Emmanuel K., Zimmerman, Matthew, Prideaux, Brendan, Desai, Prashant V., Masquelin, Thierry, Via, Laura E., Dartois, Véronique, Boshoff, Helena I., Barry, Clifton E., Ehrt, Sabine and Schnappinger, Dirk (2019). Plasticity of the Mycobacterium tuberculosis respiratory chain and its impact on tuberculosis drug development. Nature Communications, 10 (1) 4970, 4970. doi: 10.1038/s41467-019-12956-2