Associate Professor Daniel Ortiz-Barrientos
ARC Future Fellow
School of Biological Sciences, Faculty of Science
| Featured projects | Duration |
|---|---|
|
Genome-Phaser: protocol for fully phasing whole genome variants using haplotagging Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2021 |
Book Chapters
Arenas-Castro, Henry, Brittain, Beth, Matute, Daniel R. and Ortiz-Barrientos, Daniel (2019). Reinforcement. Evolutionary biology. (pp. - ) edited by Douglas J. Futuyma. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/obo/9780199941728-0120
Ortiz-Barrientos, Daniel (2016). Species concepts and speciation. Encyclopedia of evolutionary biology. (pp. 216-227) edited by Richard M. Kliman. Kidlington, Oxford, United Kingdom: Academic Press. doi: 10.1016/B978-0-12-800049-6.00061-5
Journal Articles
Wilkinson, Melanie J., McLay, Kathleen, Kainer, David, Elphinstone, Cassandra, Dillon, Natalie L., Webb, Matthew, Wijesundara, Upendra K., Ali, Asjad, Bally, Ian S. E., Munyengwa, Norman, Furtado, Agnelo, Henry, Robert J., Hardner, Craig M. and Ortiz‐Barrientos, Daniel (2024). Centromeres are hotspots for chromosomal inversions and breeding traits in mango. New Phytologist, 245 (2), 899-913. doi: 10.1111/nph.20252
Broad, Zoe, Lefreve, James, Wilkinson, Melanie J., Barton, Samuel, Barbier, Francois, Jung, Hyungtaek, Donovan, Diane and Ortiz‐Barrientos, Daniel (2024). Gravitropic Gene Expression Divergence Associated With Adaptation to Contrasting Environments in an Australian Wildflower. Molecular Ecology, e17543. doi: 10.1111/mec.17543
O’Brien, Nicholas L. V., Holland, Barbara, Engelstädter, Jan and Ortiz-Barrientos, Daniel (2024). The distribution of fitness effects during adaptive walks using a simple genetic network. PLOS Genetics, 20 (5) e1011289, e1011289. doi: 10.1371/journal.pgen.1011289
James, Maddie E. and Ortiz‐Barrientos, Daniel (2024). The genomic consequences of selection across development. Molecular Ecology, 33 (4) e17280. doi: 10.1111/mec.17280
Thompson, Ken A., Brandvain, Yaniv, Coughlan, Jenn M., Delmore, Kira E., Justen, Hannah, Linnen, Catherine R., Ortiz-Barrientos, Daniel, Rushworth, Catherine A., Schneemann, Hilde, Schumer, Molly and Stelkens, Rike (2023). The Ecology of Hybrid Incompatibilities. Cold Spring Harbor Perspectives in Biology, 16 (9) a041440, 1-31. doi: 10.1101/cshperspect.a041440
Barton, Samuel, Broad, Zoe, Ortiz-Barrientos, Daniel, Donovan, Diane and Lefevre, James (2023). Hypergraphs and centrality measures identifying key features in gene expression data. Mathematical Biosciences, 366 109089, 1-14. doi: 10.1016/j.mbs.2023.109089
Gao, Lexuan, Kantar, Michael B., Moxley, Dylan, Ortiz-Barrientos, Daniel and Rieseberg, Loren H. (2023). Crop adaptation to climate change: an evolutionary perspective. Molecular Plant, 16 (10), 1518-1546. doi: 10.1016/j.molp.2023.07.011
James, Maddie E., Allsopp, Robin N., Groh, Jeffrey S., Kaur, Avneet, Wilkinson, Melanie J. and Ortiz‐Barrientos, Daniel (2023). Uncovering the genetic architecture of parallel evolution. Molecular Ecology, 32 (20), 5575-5589. doi: 10.1111/mec.17134
James, Maddie E., Brodribb, Tim, Wright, Ian J., Rieseberg, Loren H. and Ortiz-Barrientos, Daniel (2023). Replicated evolution in plants. Annual Review of Plant Biology, 74 (1), 697-725. doi: 10.1146/annurev-arplant-071221-090809
Rieseberg, Loren, Warschefsky, Emily, Ortiz‐Barrientos, Daniel, Kane, Nolan C., Thresher, Kiimberley and Sibbett, Benjamin (2023). Editorial 2023. Molecular Ecology, 32 (1), 1-25. doi: 10.1111/mec.16815
Wilkinson, Melanie J., Yamashita, Risa, James, Maddie E., Bally, Ian S. E., Dillon, Natalie L., Ali, Asjad, Hardner, Craig M. and Ortiz-Barrientos, Daniel (2022). The influence of genetic structure on phenotypic diversity in the Australian mango (Mangifera indica) gene pool. Scientific Reports, 12 (1) 20614, 1-13. doi: 10.1038/s41598-022-24800-7
Ambrose, Luke, Popovic, Iva, Hereward, James, Ortiz-Barrientos, Daniel and Beebe, Nigel W. (2022). Comparisons of chemosensory gene repertoires in human and non-human feeding Anopheles mosquitoes link olfactory genes to anthropophily. iScience, 25 (7) 104521, 104521. doi: 10.1016/j.isci.2022.104521
Narum, Shawn, News, Joanna Kelley, Fountain-Jones, Nick, Hooper Junior, Rebecca, Ortiz-Barrientos, Daniel, O’Boyle, Bridget and Sibbett, Ben (2022). Editorial 2022. Molecular Ecology Resources, 22 (1), 1-8. doi: 10.1111/1755-0998.13572
Rieseberg, Loren, Warschefsky, Emily, O’Boyle, Bridget, Taberlet, Pierre, Ortiz‐Barrientos, Daniel, Kane, Nolan C. and Sibbett, Benjamin (2022). Editorial 2022. Molecular Ecology, 31 (1), 1-30. doi: 10.1111/mec.16328
Wilkinson, Melanie J., Roda, Federico, Walter, Greg M., James, Maddie E., Nipper, Rick, Walsh, Jessica, Allen, Scott L., North, Henry L., Beveridge, Christine A. and Ortiz-Barrientos, Daniel (2021). Adaptive divergence in shoot gravitropism creates hybrid sterility in an Australian wildflower. Proceedings of the National Academy of Sciences, 118 (47) e2004901118, e2004901118. doi: 10.1073/pnas.2004901118
James, Maddie E., Wilkinson, Melanie J., Bernal, Diana M., Liu, Huanle, North, Henry L., Engelstädter, Jan and Ortiz‐Barrientos, Daniel (2021). Phenotypic and genotypic parallel evolution in parapatric ecotypes of Senecio. Evolution, 75 (12), 3115-3131. doi: 10.1111/evo.14387
Ambrose, Luke, Ortiz‐Barrientos, Daniel, Cooper, Robert D., Lobo, Neil F., Burkot, Thomas R., Russell, Tanya L. and Beebe, Nigel W. (2021). Gene flow between island populations of the malaria mosquito, Anopheles hinesorum, may have contributed to the spread of divergent host preference phenotypes. Evolutionary Applications, 14 (9) eva.13288, 1-14. doi: 10.1111/eva.13288
James, Maddie E., Arenas-Castro, Henry, Groh, Jeffrey S., Allen, Scott L., Engelstädter, Jan and Ortiz-Barrientos, Daniel (2021). Highly replicated evolution of parapatric ecotypes. Molecular Biology and Evolution, 38 (11), 4805-4821. doi: 10.1093/molbev/msab207
Butlin, Roger K., Servedio, Maria R., Smadja, Carole M., Bank, Claudia, Barton, Nicholas H., Flaxman, Samuel M., Giraud, Tatiana, Hopkins, Robin, Larson, Erica L., Maan, Martine E., Meier, Joana, Merrill, Richard, Noor, Mohamed A. F., Ortiz-Barrientos, Daniel and Qvarnström, Anna (2021). Homage to Felsenstein 1981, or why are there so few/many species?. Evolution, 75 (5), 978-988. doi: 10.1111/evo.14235
Narum, Shawn, Kelley, Joanna, Fountain-Jones, Nick, Hooper, Rebecca, Ortiz-Barrientos, Daniel, O'Boyle, Bridget and Sibbett, Ben (2021). Editorial 2021. Molecular Ecology Resources, 21 (1), 1-10. doi: 10.1111/1755-0998.13304
Rieseberg, Loren, Warschefsky, Emily, O’Boyle, Bridget, Taberlet, Pierre, Ortiz-Barrientos, Daniel, Kane, Nolan C. and Sibbett, Benjamin (2021). Editorial 2021. Molecular Ecology, 30 (1), 1-25. doi: 10.1111/mec.15759
Cooper, M., Powell, O., Voss-Fels, K. P., Messina, C. D., Gho, C., Podlich, D. W., Technow, F., Chapman, S. C., Beveridge, C. A., Ortiz-Barrientos, D. and Hammer, G. L. (2021). Modelling selection response in plant breeding programs using crop models as mechanistic gene-to-phenotype (CGM-G2P) multi-trait link functions. in silico Plants, 3 (1) diaa016, 1-21. doi: 10.1093/insilicoplants/diaa016
Marden, Emily, Abbott, Richard J., Austerlitz, Frederic, Ortiz-Barrientos, Daniel, Baucom, Regina S., Bongaerts, Pim, Bonin, Aurelie, Bonneaud, Camille, Browne, Luke, Alex Buerkle, C., Caicedo, Ana L., Coltman, David W., Cruzan, Mitchell B., Davison, Angus, DeWoody, J. Andrew, Dumbrell, Alex J., Emerson, Brent C., Fountain-Jones, Nicholas M., Gillespie, Rosemary, Giraud, Tatiana, Hansen, Michael M., Hodgins, Kathryn A., Heuertz, Myriam, Hirase, Shotaro, Hooper, Rebecca, Hohenlohe, Paul, Kane, Nolan C., Kelley, Joanna L., Kinziger, Andrew P. ... Rieseberg, Loren H. (2020). Sharing and reporting benefits from biodiversity research. Molecular Ecology, 30 (5) mec.15702, 1103-1107. doi: 10.1111/mec.15702
Walter, Greg M., Richards, Thomas J., Wilkinson, Melanie J, Blows, Mark W., Aguirre, J. David and Ortiz‐Barrientos, Daniel (2020). Loss of ecologically important genetic variation in late generation hybrids reveals links between adaptation and speciation. Evolution Letters, 4 (4) evl3.187, 302-316. doi: 10.1002/evl3.187
Walter, Greg M., Abbott, Richard J., Brennan, Adrian C., Bridle, Jon R., Chapman, Mark, Clark, James, Filatov, Dmitry, Nevado, Bruno, Ortiz‐Barrientos, Daniel and Hiscock, Simon J. (2020). Senecio as a model system for integrating studies of genotype, phenotype and fitness. New Phytologist, 226 (2), 326-344. doi: 10.1111/nph.16434
Richards, Thomas J., Ortiz‐Barrientos, Daniel and McGuigan, Katrina (2019). Natural selection drives leaf divergence in experimental populations of Senecio lautus under natural conditions. Ecology and Evolution, 9 (12) ece3.5263, 6959-6967. doi: 10.1002/ece3.5263
White, Craig R., Marshall, Dustin J., Alton, Lesley A., Arnold, Pieter A., Beaman, Julian E., Bywater, Candice L., Condon, Catriona, Crispin, Taryn S., Janetzki, Aidan, Pirtle, Elia, Winwood-Smith, Hugh S., Angilletta, Michael J., Chenoweth, Stephen F., Franklin, Craig E., Halsey, Lewis G., Kearney, Michael R., Portugal, Steven J. and Ortiz-Barrientos, Daniel (2019). The origin and maintenance of metabolic allometry in animals. Nature Ecology and Evolution, 3 (4), 598-603. doi: 10.1038/s41559-019-0839-9
Walter, Greg M., Wilkinson, Melanie J., Aguirre, J. David, Blows, Mark W. and Ortiz-Barrientos, Daniel (2018). Environmentally induced development costs underlie fitness tradeoffs. Ecology, 99 (6), 1391-1401. doi: 10.1002/ecy.2234
Liew, Chia-Sin, Memory, Andrew E., Ortiz-Barrientos, Daniel, De Lange, Peter J. and Pelser, Pieter B. (2018). The delimitation and evolutionary history of the Australasian lautusoid group of Senecio (Asteraceae: Senecioneae). Taxon, 67 (1), 130-148. doi: 10.12705/671.8
Walter, Greg M., Aguirre, J. David, Blows, Mark W. and Ortiz-Barrientos, Daniel (2018). Evolution of genetic variance during adaptive radiation. American Naturalist, 191 (4), E108-E128. doi: 10.1086/696123
Ortiz-Barrientos, D. and James, M. E. (2017). Evolution of recombination rates and the genomic landscape of speciation. Journal of Evolutionary Biology, 30 (8), 1519-1521. doi: 10.1111/jeb.13116
Roda, Federico, Walter, Greg M., Nipper, Rick and Ortiz-Barrientos, Daniel (2017). Genomic clustering of adaptive loci during parallel evolution of an Australian wildflower. Molecular Ecology, 26 (14), 3687-3699. doi: 10.1111/mec.14150
Littleford-Colquhoun, Bethan L. , Clemente, Christofer, Whiting, Martin J. , Ortiz-Barrientos, Daniel and Frere, Celine H. (2017). Archipelagos of the Anthropocene: rapid and extensive differentiation of native terrestrial vertebrates in a single metropolis. Molecular Ecology, 26 (9), 2466-2481. doi: 10.1111/mec.14042
Reeve, James, Ortiz-Barrientos, Daniel and Engelstädter, Jan (2016). The evolution of recombination rates in finite populations during ecological speciation. Proceedings of the Royal Society of London - B - Biological Sciences, 283 (1841) 20161243, 20161243. doi: 10.1098/rspb.2016.1243
Beekman, Madeleine, Nieuwenhuis, Bart, Ortiz-Barrientos, Daniel and Evans, Jonathan P (2016). Sexual selection in hermaphrodites, sperm and broadcast spawners, plants and fungi. Philosophical Transactions B: Biological Sciences, 371 (1706) 20150541, 20150541. doi: 10.1098/rstb.2015.0541
Walter, Greg M., Wilkinson, Melanie J., James, Maddie E., Richards, Thomas J., Aguirre, J. David and Ortiz-Barrientos, Daniel (2016). Diversification across a heterogeneous landscape. Evolution, 70 (9), 1979-1992. doi: 10.1111/evo.13009
Richards, Thomas J., Walter, Greg M., McGuigan, Katrina and Ortiz-Barrientos, Daniel (2016). Divergent natural selection drives the evolution of reproductive isolation in an Australian wildflower. Evolution, 70 (9), 1993-2003. doi: 10.1111/evo.12994
Richards, Thomas J. and Ortiz-Barrientos, Daniel (2016). Immigrant inviability produces a strong barrier to gene flow between parapatric ecotypes of Senecio lautus. Evolution, 70 (6), 1239-1248. doi: 10.1111/evo.12936
Ortiz-Barrientos, Daniel, Engelstaedter, Jan and Rieseberg, Loren H. (2016). Recombination rate evolution and the origin of species. Trends in Ecology and Evolution, 31 (3), 226-236. doi: 10.1016/j.tree.2015.12.016
Baack, Eric, Melo, Maria Clara, Rieseberg, Loreb H. and Ortiz-Barrientos, Daniel (2015). The origins of reproductive isolation in plants. New Phytologist, 207 (4), 968-984. doi: 10.1111/nph.13424
Matute, Daniel R. and Ortiz-Barrientos, Daniel (2014). Speciation: the strength of natural selection driving reinforcement. Current Biology, 24 (19), R955-R957. doi: 10.1016/j.cub.2014.08.033
Elliott, Alysha G., Delay, Christina, Liu, Huanle, Phua, Zaiyang, Rosengren, K. Johan, Benfield, Aurelie H., Panero, Jose L., Colgrave, Michelle L., Jayasena, Achala S., Dunse, Kerry M., Anderson, Marilyn A., Schilling, Edward E., Ortiz-Barrientos, Daniel, Craik, David J. and Mylne, Joshua S. (2014). Evolutionary origins of a bioactive peptide buried within preproalbumin. The Plant Cell, 26 (3), 981-995. doi: 10.1105/tpc.114.123620
Melo, Maria C., Grealy, Alicia, Brittain, Beth, Walter, Greg M. and Ortiz-Barrientos, Daniel (2014). Strong extrinsic reproductive isolation between parapatric populations of an Australian groundsel. New Phytologist, 203 (1), 323-334. doi: 10.1111/nph.12779
Ortiz-Barrientos, Daniel and Baack, Eric J. (2014). Species integrity in trees. Molecular Ecology, 23 (17), 4188-4191. doi: 10.1111/mec.12867
Roda, Federico, Liu, Huanle, Wilkinson, Melanie J., Walter, Gregory M., James, Maddie E., Bernal, Diana M., Melo, Maria C., Lowe, Andrew, Rieseberg, Loren H., Prentis, Peter and Ortiz-Barrientos, Daniel (2013). Convergence and divergence during the adaptation to similar environments by an Australian groundsel. Evolution, 67 (9), 2515-2529. doi: 10.1111/evo.12136
Roda, Federico, Ambrose, Luke, Walter, Gregory M., Liu, Huanle L., Schaul, Andrea, Lowe, Andrew, Pelser, Pieter B., Prentis, Peter, Rieseberg, Loren H. and Ortiz-Barrientos, Daniel (2013). Genomic evidence for the parallel evolution of coastal forms in the Senecio lautus complex. Molecular Ecology, 22 (11), 2941-2952. doi: 10.1111/mec.12311
Ortiz-Barrientos, Daniel (2013). The color genes of speciation in plants. Genetics, 194 (1), 39-42. doi: 10.1534/genetics.113.150466
Sambatti, Julianno B. M., Strasburg, Jared L., Ortiz-Barrientos, Daniel, Baack, Eric J. and Rieseberg, Loren H. (2012). Reconciling extremely strong barriers with high levels of gene exchange in annual sunflowers. Evolution, 66 (5), 1459-1473. doi: 10.1111/j.1558-5646.2011.01537.x
David, Gwendolyn K., Condon, Catriona H., Bywater, Candice L., Ortiz-Barrientos, Daniel and Wilson, Robbie S. (2011). Receivers limit the prevalence of deception in humans: Evidence from diving behaviour in humans. PLoS One, 6 (10) e26017, e26017-1-e26017-5. doi: 10.1371/journal.pone.0026017
Prentis, Peter J., Woolfit, Megan, Thomas-Hall, Skye R., Ortiz-Barrientos, Daniel, Pavasovic, Ana, Lowe, Andrew J. and Schenk, Peer M. (2010). Massively parallel sequencing and analysis of expressed sequence tags in a successful invasive plant. Annals of Botany, 106 (6), 1009-1017. doi: 10.1093/aob/mcq201
Jasinska, A. J., Service, S., Jawaheer, D., DeYoung, J., Levinson, M., Zhang, Z., Kremeyer, B., Muller, H., Aldana, I., Garcia, J., Restrepo, G., Lopez, C., Palacio, C., Duque, C., Parra, M., Vega, J., Ortiz, D., Bedoya, G., Mathews, C., Davanzo, P., Fournier, E., Bejarano, J., Ramirez, M., Araya Ortiz, C., Araya, X., Molina, J., Sabatti, C., Reus, V., Ospina, J. ... Freimer, N. B. (2009). A narrow and highly significant linkage signal for severe bipolar disorder in the chromosome 5q33 region in Latin American pedigrees. American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics, 150 (7), 998-1006. doi: 10.1002/ajmg.b.30956
Ortiz-Barrientos, Daniel, Grealy, Alicia and Nosil, Patrik (2009). The genetics and ecology of reinforcement: Implications for the evolution of prezygotic isolation in sympatry and beyond. Annals of the New York Academy of Sciences, 1168, 156-182. doi: 10.1111/j.1749-6632.2009.04919.x
Nosil, Patrik, Funk, Daniel J. and Ortiz-Barrientos, Daniel (2009). Divergent selection and heterogenous genomic divergence. Molecular Ecology, 18 (3), 375-402. doi: 10.1111/j.1365-294X.2008.03946.x
Sambatti, J. B. M., Ortiz-Barrientos, D., Baack, E. J. and Rieseberg, L. H. (2008). Ecological selection maintains cytonuclear incompatibilities in hybridizing sunflowers. Ecology Letters, 11 (10), 1082-1091. doi: 10.1111/j.1461-0248.2008.01224.x
Ortiz-Barrientos, Daniel and Kane, Nolan C. (2007). Meeting review: American Genetics Association Symposium on the genetics of speciation. Molecular Ecology, 16 (14), 2852-2854. doi: 10.1111/j.1365-294X.2007.03358.x
Etges, William J., de Oliveira, Cassia Cardoso, Gragg, Erin, Ortiz-Barrientos, Daniel, Noor, Mohamed A. F. and Ritchie, Michael G. (2007). Genetics of incipient speciation in Drosophila mojavensis. I. Male courtship song, mating success, and genotype X environment interactions. Evolution, 61 (5), 1106-1119. doi: 10.1111/j.1558-5646.2007.00104.x
Ortíz-Barrientos, Daniel, Counterman, Brian A. and Noor, Mohamed A. F. (2007). Gene expression divergence and the origin of hybrid dysfunctions. Genetica, 129 (1), 71-81. doi: 10.1007/s10709-006-0034-1
Ortiz-Barrientos, Daniel, Chang, Audrey, S. and Noor, Mohamed A. F. (2006). A recombinational portrait of the Drosophila pseudoobscura genome. Genetical Research, 87 (1), 23-31. doi: 10.1017/S0016672306007932
Ortiz-Barrientos, D. and Rieseberg, L. H. (2006). Splitting when together. Heredity, 97 (1), 2-3. doi: 10.1038/sj.hdy.6800840
Herzberg, Ibi, Jasinska, Anna, Garcia, Jenny, Jawaheer, Damini, Service, Susan, Kremeyer, Barbara, Duque, Constanza, Parra, María V., Vega, Jorge, Ortiz, Daniel, Carvajal, Luis, Polanco, Guadalupe, Restrepo, Gabriel J., Lopez, Carlos, Palacio, Carlos, Levinson, Matthew, Aldana, Ileana, Mathews, Carol, Davanzo, Pablo, Molina, Julio, Fournier, Eduardo, Bejarano, Julio, Ramirez, Magui, Ortiz, Carmen Araya, Araya, Xinia, Sabatti, Chiara, Reus, Victor, Macaya, Gabriel, Bedoya, Gabriel ... Ruiz-Linares, Andrés (2006). Convergent linkage evidence from two Latin-American population isolates supports the presence of a susceptibility locus for bipolar disorder in 5q31-34. Human Molecular Genetics, 15 (21), 3146-3153. doi: 10.1093/hmg/ddl254
Noor, Mohamed A. F. and Ortiz-Barrientos, Daniel (2006). Simulating natural conditions in the laboratory: A re-examination of sexual isolation between sympatric and allopatric populations of Drosophila pseudoobscura and D. persimilis. Behavior Genetics, 36 (2), 322-327. doi: 10.1007/s10519-005-9033-8
Torres, Maria M., Bravi, Claudio M., Bortolini, Maria-Cátira, Duque, Constanza, Callegari-Jacques, Sidia, Ortiz, Daniel, Bedoya, Gabriel, De Restrepo, Helena G. and Ruiz-Linares, Andrés (2006). A revertant of the major founder native American haplogroup C common in populations from northern South America. American Journal of Human Biology, 18 (1), 59-65. doi: 10.1002/ajhb.20461
Ortiz-Barrientos, Daniel and Noor, Mohamed A. F. (2005). Evidence for a one-allele assortative mating locus. Science, 310 (5753), 1467-1467. doi: 10.1126/science.1121260
Richards, Stephen, Liu, Yue, Bettencourt, Brian R., Hradecky, Pavel, Letovsky, Stan, Nielsen, Rasmus, Thornton, Kevin, Hubisz, Melissa J., Chen, Rui, Meisel, Richard P., Couronne, Olivier, Hua, Sujun, Smith, Mark A., Zhang, Peili, Liu, Jing, Bussemaker, Harmen J., van Batenburg, Marinus F., Howells, Sally L., Scherer, Steven E., Sodergren, Erica, Matthews, Beverly B., Crosby, Madeline A., Schroeder, Andrew J., Ortiz-Barrientos, Daniel, Rives, Catharine M., Metzker, Michael L., Muzny, Donna M., Scott, Graham, Steffen, David ... Gibbs, Richard A. (2005). Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution. Genome Research, 15 (1), 1-18. doi: 10.1101/gr.3059305
Ortiz-Barrientos, Daniel, Counterman, Brian A. and Noor, Mohamed A. F. (2004). The genetics of speciation by reinforcement. Plos Biology, 2 (12), 2256-2263. doi: 10.1371/journal.pbio.0020416
Counterman, BA, Ortiz-Barrientos, D and Noor, MAF (2004). Using comparative genomic data to test for fast-x evolution. Evolution, 58 (3), 656-660. doi: 10.1554/03-413
Ortiz-Barrientos, Daniel, Reiland, Jane, Hey, Jody and Noor, Mohamed A.F. (2002). Recombination and the divergence of hybridizing species. Genetica, 116 (2-3), 167-178. doi: 10.1023/A:1021296829109
Mesa, Natalia R., Mondragón, María C., Soto, Iván D., Parra, María V., Duque, Constanza, Ortíz-Barrientos, Daniel, García, Luis F., Velez, Iván D., Bravo, María L., Múnera, Juan G., Bedoya, Gabriel, Bortolini, Maria-Cátira and Ruiz-Linares, Andrés (2000). Autosomal, mtDNA and Y-chromosome diversity in Amerinds: pre and post-Columbian patterns of gene flow in South America. The American Journal of Human Genetics, 67 (5), 1277-1286. doi: 10.1016/S0002-9297(07)62955-3
Carvajal-Carmona, Luis G., Soto, Iván D., Pineda, Nicolás, Ortíz-Barrientos, Daniel, Duque, Constanza, Ospina-Duque, Jorge, McCarthy, Mark, Montoya, Patricia, Alvarez, Victor M., Bedoya, Gabriel and Ruiz-Linares, Andrés (2000). Strong Amerind/White sex bias and a possible sephardic contribution among the founders of a population in Northwest Colombia. The American Journal of Human Genetics, 67 (5), 1287-1295. doi: 10.1016/S0002-9297(07)62956-5
Ospina-Duque, J, Duque, C, Carvajal-Carmona, L, Ortiz-Barrientos, D, Soto, I, Pineda, N, Cuartas, M, Calle, J, Lopez, C, Ochoa, L, Garcia, J, Gomez, J, Agudelo, A, Lozano, M, Montoya, G, Ospina, A, Lopez, M, Gallo, A, Miranda, A, Serna, L, Montoya, P, Palacio, C, Bedoya, G, McCarthy, M, Reus, V, Freimer, N and Ruiz-Linares, A (2000). An association study of bipolar mood disorder (type I) with the 5-HTTLPR serotonin transporter polymorphism in a human population isolate from Colombia. Neuroscience Letters, 292 (3), 199-202. doi: 10.1016/S0304-3940(00)01464-6
Ospina-Duque, J., Duque, C., Carvajal-Carmona, L., Cuartas, M., Ortiz-Barrientos, D., Soto, I., Pineda, N., Calle, J., López, C., Ochoa, L., García, J., Gomez, J., Agudelo, A., Lozano, M., Montoya, G., Ospina, A., López, M., Gallo, A., Miranda, A., Serna, L., Montoya, P., Palacio, C., Bedoya, G., McCarthy, M., Reus, V., Freimer, N. and Ruiz-Linares, A. (2000). Lack of association between a serotonin transporter promoter polymorphism and BP1 in Antioquia, Colombia. American Journal of Medical Genetics - Neuropsychiatric Genetics, 96 (4), 490-491.
Ospina-Duque, J., Carvajal-Carmona, L., Calle, J., López, C., Ochoa, L., García, J., Cuartas, M., Ortiz-Barrientos, D., Pineda, N., Gomez, J., Agudelo, A., Lozano, M., Montoya, G., Ospina, A., López, M., Gallo, A., Miranda, A., Serna, L., Montoya, P., Palacio, C., Bedoya, G., McCarthy, M., Reus, V., Freimer, N. and Ruiz-Linares, A. (2000). A search for genetic loci involved in predisposition to bipolar mood disorder in the population of Antioquia, Colombia. American Journal of Medical Genetics - Neuropsychiatric Genetics, 96 (4)
Ospina-Duque, Jorge, Duque, Constanza, Carvajal-Carmona, Luis, Ortiz-Barrientos, Daniel, Soto, Ivan, Pineda, Nicolas, Cuartas, Mauricio, Calle, Jorge, Lopez, Carlos, Ochoa, Luis, Garcia, Jenny, Gomez, Juliana, Agudelo, Angela, Lozano, Maria, Montoya, Gabriel, Ospina, Angelica, Lopez, Maria, Gallo, Aurora, Miranda, Ana, Serna, Lina and et al (2000). An association study of bipolar mood disorder type I with the 5-HTTLPR serotonin transporter polymorphism in a population isolate from Colombia. Neuroscience Letters, 292 (3), 199-202. doi: 10.1016/S0304-3940(00)01464-6
Ruiz Linares, Andres, Ortiz-Barrientos, Daniel, Figueroa, Mauricio, Mesa, Natalia, Munera, Juan G., Bedoya, Gabriel, Velez, Ivan D., Garcia, Luis F., Perez-Lezaun, Anna, Bertranpetit, Jaume, Feldman, Marcus W. and Goldstein, David B. (1999). Microsatellites provide evidence of Y-chromosome diversity among the founders of the New World. Proceedings of the National Academy of Sciences of the United States of America, 96 (11), 6312-6317. doi: 10.1073/pnas.96.11.6312
Ruiz-Linares, A, Ortiz-Barrientos, D, Figueroa, M, Mesa, N, Munera, JG, Bedoya, G, Velez, ID, Garcia, LF, Perez-Lezaun, A, Bertranpetit, J, Feldman, MW and Goldstein, DB (1999). Microsatellites provide evidence for Y chromosome diversity among the founders of the New World. Proceedings of the National Academy of Sciences of the United States of America, 96 (11), 6312-6317. doi: 10.1073/pnas.96.11.6312
Conference Papers
Munyengwa, N., Peace, C., Dillon, N.L., Ortiz-Barrientos, D., Christie, N., Myburg, A.A. and Hardner, C. (2023). SNP and haplotype-based genomic prediction of fruit quality traits in sweet cherry (Prunus avium). XXXI International Horticultural Congress (IHC2022): International Symposium on Breeding and Effective Use of Biotechnology and Molecular Tools in Horticultural Crops, Angers, France, 14-20 August 2022. Leuven, Belgium: International Society for Horticultural Science. doi: 10.17660/actahortic.2023.1362.23
David, G. K., Wilson, R. S. and Ortiz-Barrientos, D. (2011). Diving in soccer: When does it pay to be dishonest?. Annual Meeting of the Society-for-Integrative-and-Comparative-Biology, Salt Lake City Ut, Jan 03-07, 2011. CARY: OXFORD UNIV PRESS INC.
Ospina-Duque, J, Duque, C, Carvajal-Carmona, L, Ortiz-Barrientos, D, Soto, I, Pineda, N, Cuartas, M, Calle, J, Lopez, C, Ochoa, L, Garcia, J, Miranda, A, Sema, L, Montoya, P, Palacio, C, Bedoya, G, McCarthy, M, Reus, V, Freimer, N and Ruiz-Linares, A (2000). Lack of association between a serotonin transporter promoter polymorphism and bipolar disorder in Antioquia, Colombia..
Carvajal-Carmona, LG, Ospina-Duque, J, Calle, J, Lopez, C, Ochoa, L, Garcia, J, Ortiz-Barrientos, D, Pineda, N, Ospina, A, Lopez, M, Gallo, A, Miranda, A, Cuartas, M, Montoya, P, Palacio, C, Bedoya, G, McCarthy, M, Reus, V, Freimer, N and Linares, AR (2000). A search for genetic loci involved in predisposition to bipolar mood disorder in the population of Antioquia, Colombia.. WILEY-LISS.
Ospina-Duque, J, Carvajal-Carmona, L, Calle, J, Lopez, C, Ochoa, L, Garcia, J, Cuartas, M, Ortiz-Barrientos, D, Pineda, N, Gomez, J, Agudelo, A, Lozano, M, Montoya, G, Ospina, A, Lopez, M, Gallo, A, Miranda, A, Serna, L, Montoya, P, Palacio, C, Bedoya, G, McCarthy, M, Reus, V, Freimer, N and Ruiz-Linares, A (2000). A search for genetic loci involved in predisposition to bipolar mood disorder in the population of Antioquia, Colombia.. NEW YORK: WILEY-LISS.
Ospina-Duque, J, Duque, C, Carvajal-Carmona, L, Cuartas, M, Ortiz-Barrientos, D, Soto, I, Pineda, N, Calle, J, Lopez, C, Ochoa, L, Garcia, J, Gomez, J, Agudelo, A, Lozano, M, Montoya, G, Ospina, A, Lopez, M, Gallo, A, Miranda, A, Serna, L, Montoya, P, Palacio, C, Bedoya, G, McCarthy, M, Reus, V, Freimer, N and Ruiz-Linares, A (2000). Lack of association between a serotonin transporter promoter polymorphism and BP1 in Antioquia, Colombia.. NEW YORK: WILEY-LISS.
Data Collections
O'Brien, Nicholas, Ortiz-Barrientos, Daniel, Engelstaedter, Jan and Holland, Barbara (2024). Data associated with publication: The genetic architecture of polygenic adaptation under a network-derived trait. The University of Queensland. (Dataset) doi: 10.48610/1a19d80
Broad, Zoe and Ortiz-Barrientos, Daniel (2024). Data associated with "Gravitropic gene expression divergence associated with adaptation to contrasting environments in an Australian wildflower". The University of Queensland. (Dataset) doi: 10.48610/eaea206
O'Brien, Nicholas, Ortiz-Barrientos, Daniel, Engelstaedter, Jan and Holland, Barbara (2023). Data associated with publication: O'Brien et al. "The distribution of fitness effects during adaptive walks using a simple genetic network". The University of Queensland. (Dataset) doi: 10.48610/f3850b0
Allsopp, Robin, James, Maddie, Ortiz-Barrientos, Daniel, Wilkinson, Melanie, Groh, Jeffrey and Kaur, Avneet (2023). Data associated with publication: James et al. "Uncovering the genetic architecture of parallel evolution". The University of Queensland. (Dataset) doi: 10.48610/40dec7a
Wilkinson, Melanie J., Roda, Federico, Walter, Greg M., James, Maddie E., Nipper, Rick, Walsh, Jessica, Allen, Scott L., North, Henry L., Beveridge, Christine A. and Ortiz-Barrientos, Daniel (2021). Data associated with forthcoming publication - Wilkinson et al. 2021 - "Adaptive divergence in shoot gravitropism creates hybrid sterility in an Australian wildflower". The University of Queensland. (Dataset) doi: 10.48610/2c603c6