Expertise
- Analysis of long-read RNA sequencing data
- Non-coding RNA annotation
- Computational gene finding
Researcher biography
Dean Basic is a graduate Computational Biologist who joined the Genome Innovation Hub in 2022 after completing his Masters at the Queensland Brain Institute of the University of Queensland. At the Queensland Brain Institute, he employed Oxford Nanopore long read RNA sequencing to expand the annotation of Mouse pseudogenes and long non-coding RNAs. His interests include all things long-read RNA sequencing, the creation of more accurate biological data annotations and the application of computational approaches for inferring the functional status of novel genetic elements.
| Featured projects | Duration |
|---|---|
|
Long read spatial transcriptomics Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
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High-throughput sequencing of protein variant libraries Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
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Proximity ligation sequencing of mixed bacterial communities Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
|
Adaptive sequencing for metagenomic sequencing of low biomass samples Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2022 |
|
Identification and exploitation of genome landing pads for cattle. Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2022 |
|
Bacterial CRISPRi Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
|
Ribosomal profiling with cellular specificity Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |