Expertise
- Short read sequencing
- Microscopic Imaging analysis
- Spatial genomics technologies
Researcher biography
Sohye Yoon joined the Genome Innovation Hub in 2018 after 7 years at the Scottish Fish Immunology Research Centre (SFIRC) at University of Aberdeen, UK. At the SFIRC, she attained comprehensive knowledge in immunology and utilised a wide variety of methods in the areas of molecular biology, Antibody engineering and cell biology to perform the necessary assays for her PhD and 2 post-doctoral projects. In addition to a strong record of collaboration with industries/academic researchers, she also supervised master/PhD student research projects during this time.
Since coming to the GIH, she has expanded her research capabilities into the genomics area with her strong competence in molecular biology. Sohye contributed to the development several SOPs and protocols and published literature in peer-revied journals. Her research interests also include spatial multi-omics technologies and long-read sequencing.
Featured projects | Duration |
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Understanding host-pathogen interactions through development of new co-transcriptomic single cell RNA sequencing technologies Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2020 |
Single-cell transcriptome and chromatin profiling in plant cells Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2020 |
Combining novel scSLAM-seq technology with 10x Genomics Chromium to track microchanges in newly synthesised RNA Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2020 |
Simultaneous identification of RNA-chromatin interactions and transcriptomes in single cells Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2020 |
Optimised bioinformatics and validation pipeline for genome-wide CRISPR screening data Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2021 |
Developing new "spatial omics" capabilities Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2021 |
Enabling population scale epigenomics for crop improvement Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2021 |
Using nanopore sequencing to test mRNA vaccine quality. Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2022 |
Division-based single-cell-sequencing Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2022 |
Adaptive sequencing for metagenomic sequencing of low biomass samples Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2022 |
Improving CRISPR workflows in plants Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
Nanopore sequencing of DNA from extracellular vesicles Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
Ribosomal profiling with cellular specificity Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
Quantitative transcriptome analysis (CAGE) Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2019 |
Proximity ligation sequencing of mixed bacterial communities Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2023 |
Spatial genomics technologies to study cancer and genetic diseases in tissue contexts Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2019 |
Automated single cell quantitative in situ gene expression in cells and tissues (AutoMerFISH) Genome Innovation Hub Collaborative Project (UQ infrastructure) |
2019 |